- Catch - Class in fr.ifremer.coser.data
-
Catch entity delegating to ordered array.
- Catch() - Constructor for class fr.ifremer.coser.data.Catch
-
- catchFile - Variable in class fr.ifremer.coser.bean.Project
-
Utilisé seulement lors de la création du projet (sinon, non valorisé).
- catchFileName - Variable in class fr.ifremer.coser.bean.Project
-
Nom original du fichier de captures.
- category - Variable in class fr.ifremer.coser.command.CategoryLineCommand
-
Category de données sur lequel porte l'action.
- category - Variable in class fr.ifremer.coser.control.ControlError
-
Category de l'erreur.
- category - Variable in class fr.ifremer.coser.control.ControlErrorGroup
-
- CategoryLineCommand - Class in fr.ifremer.coser.command
-
Commande faite une une category de fichier a une ligne specifique.
- CategoryLineCommand() - Constructor for class fr.ifremer.coser.command.CategoryLineCommand
-
- charts - Variable in class fr.ifremer.coser.DefaultCoserApplicationContext
-
Charts helper.
- Charts - Class in fr.ifremer.coser.result.util
-
Useful methods to generate charts.
- Charts() - Constructor for class fr.ifremer.coser.result.util.Charts
-
- Charts.ExtractGraphDataWalker - Class in fr.ifremer.coser.result.util
-
To extract graph data from a indicator data storage.
- Charts.ExtractGraphDataWalker() - Constructor for class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- checkDataCollision(Collection<GlobalResult>) - Method in class fr.ifremer.coser.services.ClientResultService
-
Met à jour les fichiers de propriétés des resultats (maps, dataSource)
and check for duplicated couple (zoneid/resulttype (map) upload).
- checkDataCollision(Collection<RSufiResultPath>) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Met à jour les fichiers de propriétés des resultats (maps, dataSource)
and check for duplicated couple (zoneid/resulttype (map) upload).
- checkFileHeader(File, CoserConstants.Category, String[]) - Method in class fr.ifremer.coser.services.CommonService
-
Check csv file header names and order depending on file category.
- cleanCurrentProjectDirectory(ProjectService, File, Collection<String>) - Method in class fr.ifremer.coser.services.WebResultService
-
Fait le menage dans le dossier courant des projets en supprimant
tout les resulat qui ont un result id present dans la liste
newResultIds.
- cleanCurrentProjectDirectory(File, Collection<String>) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Fait le menage dans le dossier courant des projets en supprimant
tout les resulat qui ont un result id present dans la liste
newResultIds.
- clearData() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
Clear all data to force free memory.
- clearData() - Method in class fr.ifremer.coser.bean.Project
-
Force all container data clear to force free memory.
- clearHistoryCommands() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- ClientResultService - Class in fr.ifremer.coser.services
-
Service to be used only by the ui client to extract and publish results.
- ClientResultService(CoserBusinessConfig) - Constructor for class fr.ifremer.coser.services.ClientResultService
-
- close() - Method in class fr.ifremer.coser.util.ProgressReader
-
- close() - Method in class fr.ifremer.coser.util.ProgressStream
-
- Command - Class in fr.ifremer.coser.command
-
Command interface.
- Command() - Constructor for class fr.ifremer.coser.command.Command
-
- commandFactory - Variable in class fr.ifremer.coser.DefaultCoserApplicationContext
-
Factory of commands.
- commandFactory - Variable in class fr.ifremer.coser.result.CoserRequestExecutor
-
To create commands.
- commands - Variable in class fr.ifremer.coser.result.CoserCommandFactory
-
Cache of command types.
- CommandService - Class in fr.ifremer.coser.services
-
Command service.
- CommandService(CoserBusinessConfig) - Constructor for class fr.ifremer.coser.services.CommandService
-
- commandService - Variable in class fr.ifremer.coser.services.ProjectService
-
- commandUUID - Variable in class fr.ifremer.coser.command.Command
-
UUID de la commande.
- comment - Variable in class fr.ifremer.coser.bean.Control
-
- comment - Variable in class fr.ifremer.coser.bean.EchoBaseProject
-
- comment - Variable in class fr.ifremer.coser.bean.Project
-
Commentaire du projet.
- comment - Variable in class fr.ifremer.coser.bean.Selection
-
- comment - Variable in class fr.ifremer.coser.command.Command
-
Command comment.
- CommonService - Class in fr.ifremer.coser.services
-
Common methods used by others services only.
- commonService - Variable in class fr.ifremer.coser.services.ProjectService
-
- commonService - Variable in class fr.ifremer.coser.services.PublicationService
-
- commonService - Variable in class fr.ifremer.coser.services.WebService
-
Deprecated.
- communityIndicatorList - Variable in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- communityIndicatorPredicate(String) - Static method in class fr.ifremer.coser.result.repository.echobase.EchoBasePredicates
-
- communityIndicatorPredicate(List<String>) - Static method in class fr.ifremer.coser.result.repository.echobase.EchoBasePredicates
-
- communityIndicatorPredicate(String) - Static method in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates
-
- communityIndicatorPredicate(List<String>) - Static method in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates
-
- communitySpeciesListPredicate(String) - Static method in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates
-
- communitySpeciesPredicate(String) - Static method in class fr.ifremer.coser.result.repository.echobase.EchoBasePredicates
-
- communitySpeciesPredicate(List<String>) - Static method in class fr.ifremer.coser.result.repository.echobase.EchoBasePredicates
-
- communitySpeciesPredicate(List<String>) - Static method in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates
-
- compareTo(ControlErrorGroup) - Method in class fr.ifremer.coser.control.ControlErrorGroup
-
- compareTo(SpeciesControlError) - Method in class fr.ifremer.coser.control.SpeciesControlError
-
- config - Variable in class fr.ifremer.coser.DefaultCoserApplicationContext
-
Application configuration.
- config - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryProvider
-
//FIXME Should remove this
Application config (used to instanciate some service).
- config - Variable in class fr.ifremer.coser.services.ClientResultService
-
- config - Variable in class fr.ifremer.coser.services.CommandService
-
- config - Variable in class fr.ifremer.coser.services.CommonService
-
- config - Variable in class fr.ifremer.coser.services.ControlService
-
- config - Variable in class fr.ifremer.coser.services.ProjectService
-
- config - Variable in class fr.ifremer.coser.services.PublicationService
-
- config - Variable in class fr.ifremer.coser.services.WebService
-
Deprecated.
- context - Variable in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- context - Variable in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- context - Variable in class fr.ifremer.coser.services.ControlService
-
- Control - Class in fr.ifremer.coser.bean
-
Control entity.
- Control() - Constructor for class fr.ifremer.coser.bean.Control
-
- control - Variable in class fr.ifremer.coser.bean.Project
-
Project control.
- ControlError - Class in fr.ifremer.coser.control
-
Class regroupant les erreurs de controle d'une entité, son type (erreur,
warning...) et les information supplémentaires permettant de la corriger
(numéro de ligne).
- ControlError() - Constructor for class fr.ifremer.coser.control.ControlError
-
- ControlErrorGroup - Class in fr.ifremer.coser.control
-
Global validation group node.
- ControlErrorGroup(CoserConstants.Category, CoserConstants.ValidationLevel, String) - Constructor for class fr.ifremer.coser.control.ControlErrorGroup
-
- ControlService - Class in fr.ifremer.coser.services
-
Validation service.
- ControlService(CoserBusinessConfig) - Constructor for class fr.ifremer.coser.services.ControlService
-
Initialise le context xworks.
- convertBracketString(List<String>) - Static method in class fr.ifremer.coser.CoserUtils
-
- convertBracketToList(String) - Static method in class fr.ifremer.coser.CoserUtils
-
Parse la string avec les gestions des () en les supprimant.
- convertCommandToLine(Command) - Method in class fr.ifremer.coser.services.ProjectService
-
Convert a command to string info
- convertLineToCommand(String) - Method in class fr.ifremer.coser.services.ProjectService
-
Convert a string line to parameterized command.
- Coordinate - Class in fr.ifremer.coser.util
-
Coordinate used to manipulate haul in map.
- Coordinate() - Constructor for class fr.ifremer.coser.util.Coordinate
-
- Coordinate(int, String, double, double) - Constructor for class fr.ifremer.coser.util.Coordinate
-
- copyControlDataToSelection(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Copy loaded control data to new created selection.
- CopyRepositoryCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/18/14.
- CopyRepositoryCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.CopyRepositoryCommand
-
- CopyRepositoryRequest - Class in fr.ifremer.coser.result.request
-
Created on 3/18/14.
- CopyRepositoryRequest() - Constructor for class fr.ifremer.coser.result.request.CopyRepositoryRequest
-
- CoserApplicationContext - Interface in fr.ifremer.coser
-
Created on 3/11/14.
- CoserBusinessConfig - Class in fr.ifremer.coser
-
Coser business application config.
- CoserBusinessConfig() - Constructor for class fr.ifremer.coser.CoserBusinessConfig
-
- CoserBusinessConfig.CoserBusinessOption - Enum in fr.ifremer.coser
-
- CoserBusinessException - Exception in fr.ifremer.coser
-
Coser exception.
- CoserBusinessException(String) - Constructor for exception fr.ifremer.coser.CoserBusinessException
-
Constructs a new exception with the specified detail message.
- CoserBusinessException(String, Throwable) - Constructor for exception fr.ifremer.coser.CoserBusinessException
-
Constructs a new exception with the specified detail message and cause.
- CoserCheckDoubleValidator - Class in fr.ifremer.coser.validators
-
Validateur de double de coser en tant que string.
- CoserCheckDoubleValidator() - Constructor for class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- CoserClassLoader - Class in fr.ifremer.coser
-
Coser class loader.
- CoserClassLoader(ClassLoader) - Constructor for class fr.ifremer.coser.CoserClassLoader
-
- CoserCommand<Repository extends ResultRepository,Request extends CoserRequest> - Interface in fr.ifremer.coser.result
-
To execute a command on a request for a given result repository.
- CoserCommandFactory - Class in fr.ifremer.coser.result
-
To create commands.
- CoserCommandFactory(Set<ResultRepositoryType>) - Constructor for class fr.ifremer.coser.result.CoserCommandFactory
-
- CoserConstants - Class in fr.ifremer.coser
-
Coser constants.
- CoserConstants() - Constructor for class fr.ifremer.coser.CoserConstants
-
- CoserConstants.Category - Enum in fr.ifremer.coser
-
Categories des données manipulées.
- CoserConstants.ValidationLevel - Enum in fr.ifremer.coser
-
Différent niveau de message de validation.
- CoserDoubleValidator - Class in fr.ifremer.coser.validators
-
Coser double validator.
- CoserDoubleValidator() - Constructor for class fr.ifremer.coser.validators.CoserDoubleValidator
-
- CoserExpressionValidator - Class in fr.ifremer.coser.validators
-
Modification de ExpressionValidator pour avoir les exceptions.
- CoserExpressionValidator() - Constructor for class fr.ifremer.coser.validators.CoserExpressionValidator
-
- CoserMainRepositoryProvider - Class in fr.ifremer.coser.result
-
Created on 3/15/14.
- CoserMainRepositoryProvider(Set<ResultRepositoryProvider<?>>) - Constructor for class fr.ifremer.coser.result.CoserMainRepositoryProvider
-
- CoserRequest - Interface in fr.ifremer.coser.result
-
Request to obtain results.
- CoserRequestBuilder<R extends CoserRequest> - Class in fr.ifremer.coser.result
-
To build requests.
- CoserRequestBuilder(Locale, Class<R>) - Constructor for class fr.ifremer.coser.result.CoserRequestBuilder
-
- CoserRequestContext - Interface in fr.ifremer.coser.result
-
Useful object used by commands.
- CoserRequestExecutor - Class in fr.ifremer.coser.result
-
To execute request all over coser result repositories.
- CoserRequestExecutor(CoserApplicationContext, CoserMainRepositoryProvider) - Constructor for class fr.ifremer.coser.result.CoserRequestExecutor
-
- CoserRequestExtractTypeListAware - Interface in fr.ifremer.coser.result.request
-
Created on 3/13/14.
- CoserRequestFacadeAware - Interface in fr.ifremer.coser.result.request
-
Place this on any request which involve a facade.
- CoserRequestIndicatorAware - Interface in fr.ifremer.coser.result.request
-
Place this on any request which involve a indicator.
- CoserRequestRepositoryResultTypeAware - Interface in fr.ifremer.coser.result.request
-
Created on 3/13/14.
- CoserRequestRepositoryTypeAware - Interface in fr.ifremer.coser.result.request
-
Created on 3/13/14.
- CoserRequestSpeciesAware - Interface in fr.ifremer.coser.result.request
-
Place this on any request which involve a species.
- CoserRequestZoneAware - Interface in fr.ifremer.coser.result.request
-
Place this on any request which involve a zone.
- CoserRequestZoneListAware - Interface in fr.ifremer.coser.result.request
-
Place this on any request which involve a zone.
- CoserResult - Interface in fr.ifremer.coser.result
-
Result of a request.
- CoserTechnicalException - Exception in fr.ifremer.coser
-
Technical exception.
- CoserTechnicalException(String) - Constructor for exception fr.ifremer.coser.CoserTechnicalException
-
- CoserTechnicalException(Throwable) - Constructor for exception fr.ifremer.coser.CoserTechnicalException
-
- CoserTechnicalException(String, Throwable) - Constructor for exception fr.ifremer.coser.CoserTechnicalException
-
- CoserUtils - Class in fr.ifremer.coser
-
Coser utility class.
- CoserUtils() - Constructor for class fr.ifremer.coser.CoserUtils
-
- createDefaultRepositoryProviders(CoserBusinessConfig) - Static method in class fr.ifremer.coser.result.CoserMainRepositoryProvider
-
- createPredicate(GetCommunityIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultDataCommand
-
- createPredicate(GetPopulationIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetPopulationIndicatorResultDataCommand
-
- createPredicate(GetCommunityIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultDataCommand
-
- createPredicate(GetPopulationIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetPopulationIndicatorResultDataCommand
-
- createProject(Project, Map<CoserConstants.Category, File>, List<File>, ProgressMonitor) - Method in class fr.ifremer.coser.services.ProjectService
-
Create new project.
- createProjectSelection(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Create and save project selection.
- creationDate - Variable in class fr.ifremer.coser.bean.EchoBaseProject
-
- creationDate - Variable in class fr.ifremer.coser.bean.Project
-
- creationDate - Variable in class fr.ifremer.coser.bean.RSufiResult
-
- CSV_FILE_ENCODING - Static variable in class fr.ifremer.coser.CoserConstants
-
CSV File encoding.
- CSV_RESULT_SEPARATOR_CHAR - Static variable in class fr.ifremer.coser.CoserConstants
-
CSV Separator for result file (estcomind/estpopind).
- CSV_SEPARATOR_CHAR - Static variable in class fr.ifremer.coser.CoserConstants
-
CSV Separator.
- currentValue - Variable in class fr.ifremer.coser.command.ModifyFieldCommand
-
Field actual value.
- customCopyDirectory(File, File, FileFilter) - Static method in class fr.ifremer.coser.CoserUtils
-
N'utilise pas la methode de commons-fileutils, car lorsqu'un répertoire
est refusé, il ne descend pas dans les sous répertoire alors que dans
notre cas il le faut.
- customCopyDirectory(File, File, FileFilter) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
N'utilise pas la methode de commons-fileutils, car lorsqu'un répertoire
est refusé, il ne descend pas dans les sous répertoire alors que dans
notre cas il le faut.
- EchoBasePredicates - Class in fr.ifremer.coser.result.repository.echobase
-
Created on 3/13/14.
- EchoBasePredicates() - Constructor for class fr.ifremer.coser.result.repository.echobase.EchoBasePredicates
-
- EchoBasePredicates.CommunityIndicatorPredicate - Class in fr.ifremer.coser.result.repository.echobase
-
- EchoBasePredicates.CommunitySpeciesPredicate - Class in fr.ifremer.coser.result.repository.echobase
-
- EchoBasePredicates.PopulationIndicatorPredicate - Class in fr.ifremer.coser.result.repository.echobase
-
- EchoBasePredicates.PopulationSpeciesPredicate - Class in fr.ifremer.coser.result.repository.echobase
-
- EchoBaseProject - Class in fr.ifremer.coser.bean
-
Represent the storage of the EchoBase project published to CoserWeb application.
- EchoBaseProject(File) - Constructor for class fr.ifremer.coser.bean.EchoBaseProject
-
- echobaseProject - Variable in class fr.ifremer.coser.bean.GlobalResult
-
- EchoBaseProject.MapFileToSpeciesCodeFunction - Class in fr.ifremer.coser.bean
-
- EchoBaseProject.MapFileToSpeciesCodeFunction(String) - Constructor for class fr.ifremer.coser.bean.EchoBaseProject.MapFileToSpeciesCodeFunction
-
- EchoBaseProject.SpeciesCodeToMapFileNameFunction - Class in fr.ifremer.coser.bean
-
- EchoBaseProject.SpeciesCodeToMapFileNameFunction(String) - Constructor for class fr.ifremer.coser.bean.EchoBaseProject.SpeciesCodeToMapFileNameFunction
-
- EchoBaseResultRepository - Class in fr.ifremer.coser.result.repository.echobase
-
Created on 3/4/14.
- EchoBaseResultRepository(EchoBaseProject) - Constructor for class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- EchoBaseResultRepositoryProvider - Class in fr.ifremer.coser.result.repository.echobase
-
Created on 3/5/14.
- EchoBaseResultRepositoryProvider(File) - Constructor for class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryProvider
-
- EchoBaseResultRepositoryType - Class in fr.ifremer.coser.result.repository.echobase
-
Created on 3/11/14.
- EchoBaseResultRepositoryType() - Constructor for class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryType
-
- editRsufiResults(Project, Selection, RSufiResult, List<File>) - Method in class fr.ifremer.coser.services.ProjectService
-
Save existing rsufi result.
- editSelectionOptions(Project, Selection, List<File>) - Method in class fr.ifremer.coser.services.ProjectService
-
Save existing rsufi result.
- EN_HEADERS - Static variable in class fr.ifremer.coser.data.Catch
-
- EN_HEADERS - Static variable in class fr.ifremer.coser.data.Haul
-
- EN_HEADERS - Static variable in class fr.ifremer.coser.data.Length
-
- EN_HEADERS - Static variable in class fr.ifremer.coser.data.Strata
-
- equals(Object) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- equals(Object) - Method in class fr.ifremer.coser.bean.GlobalResult
-
- equals(Object) - Method in class fr.ifremer.coser.bean.RSufiResultPath
-
- equals(Object) - Method in class fr.ifremer.coser.control.ControlErrorGroup
-
- escapechar - Static variable in class fr.ifremer.coser.storage.MemoryDataStorage
-
- estComIndName - Variable in class fr.ifremer.coser.bean.RSufiResult
-
- estComIndPath - Variable in class fr.ifremer.coser.bean.RSufiResult
-
Utilisé seulement pour la validation (sinon, non valorisé).
- estPopIndName - Variable in class fr.ifremer.coser.bean.RSufiResult
-
- estPopIndPath - Variable in class fr.ifremer.coser.bean.RSufiResult
-
Utilisé seulement pour la validation (sinon, non valorisé).
- execute(Request) - Method in interface fr.ifremer.coser.result.CoserCommand
-
- execute(CoserRequestContext, Repository, Request) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
- execute(CopyRepositoryRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.CopyRepositoryCommand
-
- execute(DeleteResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.DeleteResultsCommand
-
- execute(ExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataAndResultsCommand
-
- execute(ExtractRawDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataCommand
-
- execute(GetAllResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetAllResultsCommand
-
- execute(GetCommunityIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultDataCommand
-
- execute(GetCommunityIndicatorResultGraphRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultGraphCommand
-
- execute(GetIndicatorsForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForCommunityIndicatorResultCommand
-
- execute(GetIndicatorsForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForExtractRawDataAndResultsCommand
-
- execute(GetIndicatorsForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForPopulationIndicatorResultCommand
-
- execute(GetMapResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetMapResultCommand
-
- execute(GetMatchingRepositoryTypeForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetMatchingRepositoryTypeForMapResultCommand
-
- execute(GetPopulationIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetPopulationIndicatorResultDataCommand
-
- execute(GetPopulationIndicatorResultGraphRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetPopulationIndicatorResultGraphCommand
-
- execute(GetResultNameRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetResultNameCommand
-
- execute(GetSpeciesForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForExtractRawDataAndResultsCommand
-
- execute(GetSpeciesForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForMapResultCommand
-
- execute(GetSpeciesForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForPopulationIndicatorResultCommand
-
- execute(GetSpeciesListForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesListForCommunityIndicatorResultCommand
-
- execute(GetZonesForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetZonesForCommunityIndicatorResultCommand
-
- execute(GetZonesForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetZonesForExtractRawDataAndResultsCommand
-
- execute(GetZonesForExtractRawDataRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetZonesForExtractRawDataCommand
-
- execute(GetZonesForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetZonesForMapResultCommand
-
- execute(GetZonesForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetZonesForPopulationIndicatorResultCommand
-
- execute(DeleteResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.DeleteResultsCommand
-
- execute(ExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
- execute(ExtractRawDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataCommand
-
- execute(GetAllResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetAllResultsCommand
-
- execute(GetCommunityIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultDataCommand
-
- execute(GetCommunityIndicatorResultGraphRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultGraphCommand
-
- execute(GetIndicatorsForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForCommunityIndicatorResultCommand
-
- execute(GetIndicatorsForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForExtractRawDataAndResultsCommand
-
- execute(GetIndicatorsForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForPopulationIndicatorResultCommand
-
- execute(GetMapResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetMapResultCommand
-
- execute(GetMatchingRepositoryTypeForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetMatchingRepositoryTypeForMapResultCommand
-
- execute(GetPopulationIndicatorResultDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetPopulationIndicatorResultDataCommand
-
- execute(GetPopulationIndicatorResultGraphRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetPopulationIndicatorResultGraphCommand
-
- execute(GetResultNameRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetResultNameCommand
-
- execute(GetSpeciesForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForExtractRawDataAndResultsCommand
-
- execute(GetSpeciesForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForMapResultCommand
-
- execute(GetSpeciesForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForPopulationIndicatorResultCommand
-
- execute(GetSpeciesListForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesListForCommunityIndicatorResultCommand
-
- execute(GetZonesForCommunityIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetZonesForCommunityIndicatorResultCommand
-
- execute(GetZonesForExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetZonesForExtractRawDataAndResultsCommand
-
- execute(GetZonesForExtractRawDataRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetZonesForExtractRawDataCommand
-
- execute(GetZonesForMapResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetZonesForMapResultCommand
-
- execute(GetZonesForPopulationIndicatorResultRequest) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetZonesForPopulationIndicatorResultCommand
-
- executeAll(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
Execute the given request on any matching result repository.
- executeAll(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- executeAll(CoserMainRepositoryProvider, CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- executeFirst(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
Execute the given request on the first matching result repository.
- executeFirst(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- executeFirst(CoserMainRepositoryProvider, CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- executeUnique(CoserRequestContext, ExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
Extract some raw data and results from repositories and assembly them as an archive.
- executeUnique(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
Execute the given request to obtain a single result.
- executeUnique(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- executeUnique(CoserMainRepositoryProvider, CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
- exportErrorsAsHTML(Project, AbstractDataContainer, List<ControlError>) - Method in class fr.ifremer.coser.services.PublicationService
-
Export la liste d'erreurs dans un fichier html avec la liste des graphes
si necessaire.
- exportErrorsAsHTML(Project, AbstractDataContainer, List<ControlError>, Writer, boolean) - Method in class fr.ifremer.coser.services.PublicationService
-
Export la liste d'erreurs dans un fichier html avec la liste des graphes
si necessaire.
- exportWithData - Variable in class fr.ifremer.coser.services.WebService.OneResultFileFilter
-
Deprecated.
- exportWithData - Variable in class fr.ifremer.coser.util.io.OneRSufiResultFileFilter
-
- extractCharts(Collection<String>, Collection<String>, Collection<String>, Collection<String>, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les indicateurs calculés avec leurs traductions scientifique
pour la zone et l'especes souhaitées.
- extractCommunity(Predicate<String[]>) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- extractCommunity(Predicate<String[]>) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- extractCommunityResults(List<String>, String, int, int) - Method in class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataAndResultsCommand
-
Generate community graph and their data for selected indicators.
- extractCommunityResults(List<String>, String, int, int) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
Generate community graph and their data for selected indicators.
- extractControlLogAsHTML(Project, Control) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur un control au format html.
- extractControlLogAsHTML(Project, Control, Writer) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur un control au format html
dans un flux donné.
- extractControlLogAsPDF(Project, Control, List<ControlError>, File) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur un control au format pdf.
- extractData(List<String>, List<DataType>, List<String>, List<String>, List<String>, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Extrait de toutes les données les informations demandées restreintes
sur certaines zone, certaines espèces et certains indicateurs.
- extractDataMap(Collection<String>, Collection<String>) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Extrait les cartes.
- extractDirectory - Variable in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
Where to extract all data and graphs.
- extractHistoryCommandReport(Project, AbstractDataContainer, Writer) - Method in class fr.ifremer.coser.services.PublicationService
-
Partie commune aux export qui effectue en 2 passe la recuperation
des lignes d'erreur, la recuperation des données correspondant à
ces lignes dans les fichiers originaux et la sortie des erreurs.
- extractMaps(List<String>) - Method in class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataAndResultsCommand
-
Extract all maps for matchings species.
- extractMaps(List<String>) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
Extract all maps for matchings species.
- extractPopulation(Predicate<String[]>) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- extractPopulation(Predicate<String[]>) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- extractPopulationResults(List<String>, List<String>, String, int, int) - Method in class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataAndResultsCommand
-
Generate population graph and their data for selected indicators.
- extractPopulationResults(List<String>, List<String>, String, int, int) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
Generate population graph and their data for selected indicators.
- extractProjectReport(Project, Writer) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait la partie "detail projet" vers le flux.
- extractRawData(File) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- extractRawDataAndResults(CoserRequestContext, ExtractRawDataAndResultsRequest) - Method in class fr.ifremer.coser.services.WebResultService
-
Extract some raw data and results from repositories and assembly them as an archive.
- ExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- ExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataAndResultsCommand
-
- ExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- ExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
- ExtractRawDataAndResultsRequest - Class in fr.ifremer.coser.result.request
-
Request to extract data.
- ExtractRawDataAndResultsRequest() - Constructor for class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- ExtractRawDataAndResultsResult - Class in fr.ifremer.coser.result.result
-
Created on 3/15/14.
- ExtractRawDataAndResultsResult(String, MultiKeyMap<String, File>, MultiKeyMap<String, Pair<File, String>>) - Constructor for class fr.ifremer.coser.result.result.ExtractRawDataAndResultsResult
-
- ExtractRawDataCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- ExtractRawDataCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.ExtractRawDataCommand
-
- ExtractRawDataCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- ExtractRawDataCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataCommand
-
- ExtractRawDataRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain raw data results.
- ExtractRawDataRequest() - Constructor for class fr.ifremer.coser.result.request.ExtractRawDataRequest
-
- extractRSUfiData(File) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- extractRSUfiData(Project, Selection, File, boolean) - Method in class fr.ifremer.coser.services.ProjectService
-
Extrait les données de la selection pour rSufi.
- Extracts - Class in fr.ifremer.coser.result.util
-
Useful methods for extract commands.
- Extracts() - Constructor for class fr.ifremer.coser.result.util.Extracts
-
- extractSelectionLogAsHTML(Project, Selection) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur une selection au format html.
- extractSelectionLogAsHTML(Project, Selection, Writer) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur une selection au format html
dans le flux donné.
- extractSelectionLogAsPDF(Project, Selection, File) - Method in class fr.ifremer.coser.services.PublicationService
-
Extrait les logs des modifications faites sur une selection au format pdf.
- extractSource(File) - Method in class fr.ifremer.coser.result.repository.legacy.command.ExtractRawDataAndResultsCommand
-
Generate raw data after selection in a sub directory (named of the zone) of the given directory.
- extractSource(Collection<String>, File) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Genere un fichier zip des sources d'un projet.
- extractTypeList - Variable in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- extractTypeList - Variable in class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- extractTypeList - Variable in class fr.ifremer.coser.result.request.GetResultNameRequest
-
- extractTypeList - Variable in class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- generateChartFile(String, JFreeChart, int, int) - Method in class fr.ifremer.coser.result.util.Charts
-
- generateCommunityChart(String, String, String) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- generateCommunityChart(String, String, String) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- generateCommunityChart(Locale, Charts.ExtractGraphDataWalker, IndicatorMap, String, String) - Method in class fr.ifremer.coser.result.util.Charts
-
- generatedAndSendNewResultNotifications(String, WebResultService.NewUploadContext) - Method in class fr.ifremer.coser.services.WebResultService
-
- generateDechargePDF(File, Locale, Date, String) - Method in class fr.ifremer.coser.result.util.Reports
-
Genere le PDF dynamique de decharge à partir du template freemarker.
- generateDechargePDF(File, File, RSufiResult, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Genere le PDF dynamique de decharge à partir du template freemarker.
- generateExtractPDF(File, List<String>, MultiKeyMap<String, File>, MultiKeyMap<String, Pair<File, String>>, ZoneMap, Locale) - Method in class fr.ifremer.coser.result.util.Reports
-
Generate pdf file filled with maps and charts.
- generateExtractPDF(File, List<String>, MultiKeyMap, MultiKeyMap, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Generate pdf file filled with maps and charts.
- generateMetaFilePDF(RSufiResultPath, File, Locale, IndicatorMap) - Method in class fr.ifremer.coser.result.util.Reports
-
Genere le fichier PDF d'information sur les espèces incluses dans les
calculs des indicateurs de communautés, à jointe à chaque téléchargement.
- generateMetaFilePDF(Project, Selection, File, RSufiResult, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Genere le fichier PDF d'information sur les espèces incluses dans les
calculs des indicateurs de communautés, à jointe à chaque téléchargement.
- generatePopulationChart(String, String, String) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- generatePopulationChart(String, String, String) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- generatePopulationChart(Locale, Charts.ExtractGraphDataWalker, IndicatorMap, String, String) - Method in class fr.ifremer.coser.result.util.Charts
-
- generateSourceZip(Project, Selection, File, RSufiResult, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Generate zip for selection.
- get(int) - Method in interface fr.ifremer.coser.storage.DataStorage
-
Get data at specified index.
- get(int) - Method in class fr.ifremer.coser.storage.MemoryDataStorage
-
- getAge() - Method in class fr.ifremer.coser.data.Length
-
Age field.
- getAgeAsString() - Method in class fr.ifremer.coser.data.Length
-
Age field.
- GetAllResultsCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetAllResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetAllResultsCommand
-
- GetAllResultsCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetAllResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetAllResultsCommand
-
- GetAllResultsRequest - Class in fr.ifremer.coser.result.request
-
Created on 3/11/14.
- GetAllResultsRequest() - Constructor for class fr.ifremer.coser.result.request.GetAllResultsRequest
-
- getAllYears() - Method in class fr.ifremer.coser.bean.Selection
-
- getAuthor() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getAuthor() - Method in class fr.ifremer.coser.bean.Project
-
- getAvailableRepositories() - Method in exception fr.ifremer.coser.result.DuplicatedResultException
-
- getBasedir() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getBasedir() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getBasedir() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getBasedir() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getCatch() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getCatchFile() - Method in class fr.ifremer.coser.bean.Project
-
- getCatchFileName() - Method in class fr.ifremer.coser.bean.Project
-
- getCategory() - Method in class fr.ifremer.coser.command.CategoryLineCommand
-
- getCategory() - Method in class fr.ifremer.coser.control.ControlError
-
Category de l'erreur.
- getCategory() - Method in class fr.ifremer.coser.control.ControlErrorGroup
-
- getChart(String, String, String, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les indicateurs calculés avec leurs traductions scientifique
pour la zone et l'especes souhaitées.
- getChartData(String, String, String, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les indicateurs calculés avec leurs traductions scientifique
pour la zone et l'especes souhaitées.
- getChartDataFile(File, File, File, File, RSufiResult, String, String, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Generate chart data (as csv for population and as zip for community).
- getCharts() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getCharts() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getCharts() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getCharts() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getCharts() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getCharts() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getCommandFactory() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getCommandFactory() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getCommandTypes() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryType
-
- getCommandTypes() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryType
-
- getCommandTypes() - Method in interface fr.ifremer.coser.result.repository.ResultRepositoryType
-
- getCommandUUID() - Method in class fr.ifremer.coser.command.Command
-
UUID de la commande.
- getComment() - Method in class fr.ifremer.coser.bean.Control
-
- getComment() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getComment() - Method in class fr.ifremer.coser.bean.Project
-
- getComment() - Method in class fr.ifremer.coser.bean.Selection
-
- getComment() - Method in class fr.ifremer.coser.command.Command
-
Command comment.
- getCommunityIndicatorDataFile(Predicate<String[]>, String) - Method in class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultDataCommand
-
- getCommunityIndicatorDataFile(Predicate<String[]>, String) - Method in class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultDataCommand
-
- getCommunityIndicatorList() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- GetCommunityIndicatorResultDataCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetCommunityIndicatorResultDataCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultDataCommand
-
- GetCommunityIndicatorResultDataCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetCommunityIndicatorResultDataCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultDataCommand
-
- GetCommunityIndicatorResultDataRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results data.
- GetCommunityIndicatorResultDataRequest() - Constructor for class fr.ifremer.coser.result.request.GetCommunityIndicatorResultDataRequest
-
- GetCommunityIndicatorResultGraphCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetCommunityIndicatorResultGraphCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetCommunityIndicatorResultGraphCommand
-
- GetCommunityIndicatorResultGraphCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetCommunityIndicatorResultGraphCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetCommunityIndicatorResultGraphCommand
-
- GetCommunityIndicatorResultGraphRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results graph.
- GetCommunityIndicatorResultGraphRequest() - Constructor for class fr.ifremer.coser.result.request.GetCommunityIndicatorResultGraphRequest
-
- getCommunityIndicators() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getCommunityIndicators() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getCommunityIndicatorsFile() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getCommunityIndicatorStorage() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getCommunityIndicatorStorage() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getCommunitySpeciesMap() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getCommunitySpeciesMap(String) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getCommunitySpeciesMap() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getCompareCatchLengthGraph(Project, AbstractDataContainer, Collection<String>) - Method in class fr.ifremer.coser.services.PublicationService
-
Retourne les graphiques de comparaison entre le nombre de capture et
le nombre dans les tailles pour toutes les especes.
- getConfig() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getConfig() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getConfig() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getConfig() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getConfig() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getConfig() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getConfig() - Method in class fr.ifremer.coser.services.WebResultService
-
- getContentLength() - Method in class fr.ifremer.coser.util.InputStreamKnownSizeBody
- getControl() - Method in class fr.ifremer.coser.bean.Project
-
- getControlDiffCatchLength() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getControlNobsmin() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getControlTypeFish() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getCopyFileFilter(ProjectService, File, boolean) - Method in class fr.ifremer.coser.services.WebResultService
-
Retourne un file filter qui ne copiera que les dossiers resultat
correspondant au type demandé.
- getCopyFileFilter(File, boolean) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne un file filter qui ne copiera que les dossiers resultat
correspondant au type demandé.
- getCreationDate() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getCreationDate() - Method in class fr.ifremer.coser.bean.GlobalResult
-
- getCreationDate() - Method in class fr.ifremer.coser.bean.Project
-
- getCreationDate() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getCurrentValue() - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- getData() - Method in class fr.ifremer.coser.data.AbstractDataEntity
-
- getDatabaseDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getDataStorageFileName(CoserConstants.Category, String) - Method in class fr.ifremer.coser.bean.Project
-
Retourne le nom de stockage d'un fichier de données suivant la categories
de fichier demandé.
- getDataStorageFileName(Project, CoserConstants.Category, String) - Method in class fr.ifremer.coser.services.CommonService
-
Deprecated.
since 1.5, use now Project#getDataStorageFileName(Category, String)
- getDechargeFilename(Locale) - Static method in class fr.ifremer.coser.result.util.Reports
-
- getDefaultValue() - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- getDeletedCatch() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getDeletedHaul() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getDeletedLength() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getDeletedStrata() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getDensity(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Densité: nombre par km2 par espèce par année
years=sort(unique(TRAITS$Annee))
#surface total pour toutes les strates
totsurface=sum(STRATES$Surface)
#ordonner table STRATES par nom des strates
STRATES=STRATES[order(STRATES$Strate),]
#combiner les 3 tables de données dans une seule table tab
tab=merge(CAPTURES,STRATES,by.x=c("Annee","Trait"),by.y=c("Annee","Trait"))
tab=merge(tab,TRAITS, by.x=c("Annee","Trait"),by.y=c("Annee","Trait"))
species=sort(unique(CAPTURES$Espece))
#calculer la densité moyenne par année par strate par espèce
densparstrate=tapply(tab$Nombre/tab$SurfaceBalayee,list(tab$Espece, tab$Annee, tab$Strate), mean)
densparstrate[is.na(densparstrate)]=0 # remplace NA par 0
#surface par annee et strate et espèce
surfaceparstrate=tapply(tab$Surface, list(tab$Espece, tab$Annee, tab$Strate), unique)
#multiplier la densité par la surface de la strate pour obtenir nombre par année-strate
nombreparstrate= surfaceparstrate* densparstrate
#sommer nombre sur strates par année pour chaque espèce et diviser par surface totale
densiteparannee=apply(nombreparstrate,c(1,2),sum)/totsurface
#densité moyenne pour la période
densitemoyenneespece=apply(densiteparanne,1,mean)
- getDensityFilter() - Method in class fr.ifremer.coser.bean.Selection
-
- getDepth() - Method in class fr.ifremer.coser.data.Haul
-
- getDepthAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getDescription() - Method in class fr.ifremer.coser.bean.Selection
-
- getDescription(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.Command
-
Return human readable string for ui display (used in selection replay,
and undo redo commands).
- getDescription(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.DeleteLineCommand
-
- getDescription(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- getDescription(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- getDescription() - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- getDetailMessage() - Method in class fr.ifremer.coser.control.ControlError
-
Message donnant plus de précision sur l'erreur.
- getDisplaySpeciesText(String) - Method in class fr.ifremer.coser.bean.Project
-
Retourne le nom de visualisation de l'espèce conformement à la configuration
du projet.
- getDisplaySpeciesType() - Method in class fr.ifremer.coser.bean.Project
-
- getEcartData(String...) - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getEchobaseProject() - Method in class fr.ifremer.coser.bean.GlobalResult
-
- getEchoBaseProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getEchoBaseResults(File, Date, Date, boolean) - Method in class fr.ifremer.coser.services.ClientResultService
-
- getEmptyStorage(Project, CoserConstants.Category) - Method in class fr.ifremer.coser.services.CommonService
-
Get empty storage for category (filled with just header)
- getEstComIndName() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getEstComIndPath() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getEstimationData(String...) - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getEstPopIndName() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getEstPopIndPath() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getExpression() - Method in class fr.ifremer.coser.validators.RegexFieldValidator
-
- getExtractDirectory() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- getExtracts() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getExtracts() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getExtracts() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getExtracts() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getExtracts() - Method in class fr.ifremer.coser.services.WebResultService
-
- getExtractTypeList() - Method in interface fr.ifremer.coser.result.request.CoserRequestExtractTypeListAware
-
- getExtractTypeList() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- getExtractTypeList() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- getExtractTypeList() - Method in class fr.ifremer.coser.result.request.GetResultNameRequest
-
- getExtractTypeList() - Method in class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- getExtractTypes(Locale) - Static method in enum fr.ifremer.coser.util.DataType
-
- getFacade() - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- getFacade() - Method in interface fr.ifremer.coser.result.request.CoserRequestFacadeAware
-
- getFacade() - Method in class fr.ifremer.coser.result.request.ExtractRawDataRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForCommunityIndicatorResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetSpeciesForMapResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetSpeciesForPopulationIndicatorResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetZonesForCommunityIndicatorResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetZonesForExtractRawDataRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetZonesForMapResultRequest
-
- getFacade() - Method in class fr.ifremer.coser.result.request.GetZonesForPopulationIndicatorResultRequest
-
- getFacadeName() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getFacades() - Method in class fr.ifremer.coser.bean.ZoneMap
-
Get facades list (as facadeid/facadename).
- getFacades() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Get facades list (as facadeid/facadename).
- getFieldName() - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- getFieldValue(String, Object, boolean) - Method in class fr.ifremer.coser.validators.AbstractFieldValidator
-
Return the field value named name from object,
object should have the appropriate getter/setter.
- getFieldValue(String, Object, boolean) - Method in class fr.ifremer.coser.validators.CoserExpressionValidator
-
Return the field value named name from object,
object should have the appropriate getter/setter.
- getFirstMatchingRepository() - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
- getGraphData() - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getHalfStepValue(double) - Method in class fr.ifremer.coser.services.ProjectService
-
Retourne la valeur au demi pas la plus proche.
- getHaul() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getHaul() - Method in class fr.ifremer.coser.data.Catch
-
- getHaul() - Method in class fr.ifremer.coser.data.Haul
-
- getHaul() - Method in class fr.ifremer.coser.data.Length
-
- getHaulAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getHaulAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getHaulAsString() - Method in class fr.ifremer.coser.data.Length
-
- getHaulFile() - Method in class fr.ifremer.coser.bean.Project
-
- getHaulFileName() - Method in class fr.ifremer.coser.bean.Project
-
- getHeaders() - Method in class fr.ifremer.coser.data.AbstractDataEntity
-
Return CSV header according to properties names.
- getHeaders() - Method in class fr.ifremer.coser.data.Catch
-
- getHeaders() - Method in class fr.ifremer.coser.data.Haul
-
- getHeaders() - Method in class fr.ifremer.coser.data.Length
-
- getHeaders() - Method in class fr.ifremer.coser.data.Strata
-
- getHistoryCommands() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getHistoryCommandsFromProperties(Properties, String) - Method in class fr.ifremer.coser.services.ProjectService
-
Load history command list from file.
- getId() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getId() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryType
-
- getId() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getId() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryType
-
- getId() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getId() - Method in interface fr.ifremer.coser.result.repository.ResultRepositoryType
-
- getIds() - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getIndicator() - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- getIndicator() - Method in interface fr.ifremer.coser.result.request.CoserRequestIndicatorAware
-
- getIndicator() - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- getIndicatorLists(String, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les listes sur lequel l'indicateur fournit a ete calculé.
- getIndicatorMap() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getIndicatorMap() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getIndicatorMap() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getIndicatorMap() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getIndicators(String, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les indicateurs calculés avec leurs traductions scientifique
pour la zone et l'especes souhaitées.
- getIndicators(Collection<String>, DataType, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les indicateurs calculés avec leurs traductions scientifique
pour les zones souhaitées.
- GetIndicatorsForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetIndicatorsForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForCommunityIndicatorResultCommand
-
- GetIndicatorsForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetIndicatorsForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForCommunityIndicatorResultCommand
-
- GetIndicatorsForCommunityIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results.
- GetIndicatorsForCommunityIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetIndicatorsForCommunityIndicatorResultRequest
-
- GetIndicatorsForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetIndicatorsForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForExtractRawDataAndResultsCommand
-
- GetIndicatorsForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetIndicatorsForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForExtractRawDataAndResultsCommand
-
- GetIndicatorsForExtractRawDataAndResultsRequest - Class in fr.ifremer.coser.result.request
-
Request to extract data.
- GetIndicatorsForExtractRawDataAndResultsRequest() - Constructor for class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- GetIndicatorsForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetIndicatorsForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetIndicatorsForPopulationIndicatorResultCommand
-
- GetIndicatorsForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetIndicatorsForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetIndicatorsForPopulationIndicatorResultCommand
-
- GetIndicatorsForPopulationIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results.
- GetIndicatorsForPopulationIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- getIndicatorsMap() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getIndicatorsMap() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getIndicatorsMap() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Charge les indicateurs disponible depuis le fichier des indicateurs.
- getIndicatorsResultsPerZone() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere dans le repertoire des projets d'indicateur les resultats
disponible par zone (il ne peut y en avoir qu'un par zone).
- getIndicatorsValues(Locale, Collection<String>) - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getIndicatorUnit(String) - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getIndicatorValue(Locale, String) - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getIndicatorValue(String, String) - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getIndicatorValue(String, String) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Get indicator translation by checking correct locale.
- getInputStream() - Method in class fr.ifremer.coser.result.result.FileResult
-
- getInternalRepositoryProvider() - Method in class fr.ifremer.coser.services.WebResultService
-
- getKey() - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- getLabel(Locale) - Method in enum fr.ifremer.coser.util.DataType
-
- getLabelKey() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryType
-
- getLabelKey() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryType
-
- getLabelKey() - Method in interface fr.ifremer.coser.result.repository.ResultRepositoryType
-
- getLastDataUpdateDate() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
Retourne la date de dernière mise à jour des données du site web.
- getLastDataUpdateDate() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne la date de dernière mise à jour des données du site web.
- getLat() - Method in class fr.ifremer.coser.data.Haul
-
- getLatAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getLatitude() - Method in class fr.ifremer.coser.util.Coordinate
-
- getLength() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getLength() - Method in class fr.ifremer.coser.data.Length
-
- getLengthAsString() - Method in class fr.ifremer.coser.data.Length
-
- getLengthFile() - Method in class fr.ifremer.coser.bean.Project
-
- getLengthFileName() - Method in class fr.ifremer.coser.bean.Project
-
- getLengthStructure(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.services.ProjectService
-
Présentation du graphique : histogramme de distribution en tailles par
espèce, par strate et par année (une planche par espèce et par année)
pour toute la série.
- getLevel() - Method in class fr.ifremer.coser.control.ControlError
-
Niveau de l'erreur (fatal, error, warning, info).
- getLine() - Method in class fr.ifremer.coser.data.AbstractDataEntity
-
- getLineNumber() - Method in class fr.ifremer.coser.command.CategoryLineCommand
-
- getLineNumbers() - Method in class fr.ifremer.coser.control.ControlError
-
Numero des lignes dans le fichier CSV (sorted by implementation).
- getListParam(String) - Method in class fr.ifremer.coser.result.CoserRequestBuilder
-
- getLocale() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getLocale() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getLocale() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getLocale() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getLocale() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getLogString(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.Command
-
Return human readable string for log output.
- getLogString(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.DeleteLineCommand
-
- getLogString(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- getLogString(Project, AbstractDataContainer) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- getLong() - Method in class fr.ifremer.coser.data.Haul
-
- getLongAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getLongitude() - Method in class fr.ifremer.coser.util.Coordinate
-
- getMapFile(String, String) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere le fichier image de la carte demandées en fonction de la zone
et de l'espece.
- GetMapResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetMapResultCommand
-
- GetMapResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetMapResultCommand
-
- GetMapResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain map results.
- GetMapResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetMapResultRequest
-
- getMaps() - Method in class fr.ifremer.coser.bean.Project
-
- getMapsDirectory() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getMapsPath() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getMapSpecies() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getMapSpeciesFile(String) - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getMapSpeciesFile(String) - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getMapSpeciesMap() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getMapSpeciesMap() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getMapSpeciesMap() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getMapsResultsPerZone() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere dans le repertoire des projets d'indicateur les resultats
disponible par zone (il ne peut y en avoir qu'un par zone).
- getMatchingRepositories() - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
- getMatchingRepositories(CoserRequestContext, CoserRequest) - Method in class fr.ifremer.coser.result.CoserRequestExecutor
-
- GetMatchingRepositoryTypeForMapResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 6/4/14.
- GetMatchingRepositoryTypeForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetMatchingRepositoryTypeForMapResultCommand
-
- GetMatchingRepositoryTypeForMapResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 6/4/14.
- GetMatchingRepositoryTypeForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetMatchingRepositoryTypeForMapResultCommand
-
- GetMatchingRepositoryTypeForMapResultRequest - Class in fr.ifremer.coser.result.request
-
To find out whihc repository type matchs this request.
- GetMatchingRepositoryTypeForMapResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- getMaturity() - Method in class fr.ifremer.coser.data.Length
-
- getMaturityAsString() - Method in class fr.ifremer.coser.data.Length
-
- getMax() - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- getMaxExclusive() - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- getMaxYear() - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getMessage() - Method in class fr.ifremer.coser.control.ControlError
-
Message explicitant l'erreur de validation.
- getMessage() - Method in class fr.ifremer.coser.control.ControlErrorGroup
-
- getMetaDataFile() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getMin() - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- getMinDecimals() - Method in class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- getMinExclusive() - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- getMinYear() - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getMonth() - Method in class fr.ifremer.coser.data.Haul
-
- getMonthAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getMultiplicator() - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getName() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getName() - Method in class fr.ifremer.coser.bean.GlobalResult
-
- getName() - Method in class fr.ifremer.coser.bean.Project
-
- getName() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getName() - Method in class fr.ifremer.coser.bean.Selection
-
- getName() - Method in class fr.ifremer.coser.util.Coordinate
-
- getNewResultNotificationList() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getNewSpecyName() - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- getNewValue() - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- getNotAvailable() - Method in class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- getNumber() - Method in class fr.ifremer.coser.data.Catch
-
- getNumber() - Method in class fr.ifremer.coser.data.Length
-
- getNumberAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getNumberAsString() - Method in class fr.ifremer.coser.data.Length
-
- getOccurrence(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Occurrence : pourcentage des traits dans lesquels une espèce est présentes
years=seq(min(CAPTURES$Annee), max(CAPTURES$Annee))
nyears=length(years)
catch=CAPTURES[CAPTURES$Nombre>0,] #prendre seulement données positives
#compter nombre de traits par année où chaque espèce est présent
occurence=tapply(catch$Trait,list(species=catch$Espece,year=catch$Annee),lengthunique)
occurrence[is.na(occurence)]<-0
rapport.func=function(x,v) {return (x/v);}
#diviser nombre de traits avec présence par nombre total de traits
pct.occur=apply(occurence,1,rapport.func,v=haulcount)# haulcount de 1)
pct.occur=t(round(pct.occur*100,2)) # multiplier par 100 et arrondir à 2 décimales
colnames(pct.occur)=colnames(haulcount) #affectation noms colonnes matrice
rownames(pct.occur)=rownames(occur) #nom des espèces
#calculerl l'occurrence moyenne à travers les années
provi.oc=round(apply(pct.occur,1,mean),2)
pct.occur=cbind(pct.occur,MeanOccurence=provi.oc)
- getOccurrenceFilter() - Method in class fr.ifremer.coser.bean.Selection
-
- getOriginalContent(Project, CoserConstants.Category, Collection<String>) - Method in class fr.ifremer.coser.services.CommonService
-
Lit tout le fichier associé à la categorie demandé, mais ne retourne
que les données correspondant au numéro de lignes demandée.
- getOriginalFileContent(File, Collection<String>) - Method in class fr.ifremer.coser.services.CommonService
-
Lit le fichier demandé et sauve dans une map les lignes demandées.
- getOtherFiles() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getOtherFiles() - Method in class fr.ifremer.coser.bean.Selection
-
- getOutputSpeciesType() - Method in class fr.ifremer.coser.bean.Project
-
- getParam(String) - Method in class fr.ifremer.coser.result.CoserRequestBuilder
-
- getPath() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getPopulationIndicatorList() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- GetPopulationIndicatorResultDataCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetPopulationIndicatorResultDataCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetPopulationIndicatorResultDataCommand
-
- GetPopulationIndicatorResultDataCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetPopulationIndicatorResultDataCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetPopulationIndicatorResultDataCommand
-
- GetPopulationIndicatorResultDataRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain population indicator results data.
- GetPopulationIndicatorResultDataRequest() - Constructor for class fr.ifremer.coser.result.request.GetPopulationIndicatorResultDataRequest
-
- GetPopulationIndicatorResultGraphCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetPopulationIndicatorResultGraphCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetPopulationIndicatorResultGraphCommand
-
- GetPopulationIndicatorResultGraphCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetPopulationIndicatorResultGraphCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetPopulationIndicatorResultGraphCommand
-
- GetPopulationIndicatorResultGraphRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain population indicator result as a graph.
- GetPopulationIndicatorResultGraphRequest() - Constructor for class fr.ifremer.coser.result.request.GetPopulationIndicatorResultGraphRequest
-
- getPopulationIndicators() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getPopulationIndicators(String) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getPopulationIndicators() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getPopulationIndicators(String) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getPopulationIndicatorsFile() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getPopulationIndicatorStorage() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getPopulationIndicatorStorage() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getPopulationSpecies() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getPopulationSpecies() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getPopulationSpeciesMap() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getPopulationSpeciesMap() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getProject() - Method in class fr.ifremer.coser.bean.RSufiResultPath
-
Get project.
- getProject() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getProjectContent(Project, AbstractDataContainer, CoserConstants.Category, boolean) - Method in class fr.ifremer.coser.services.ProjectService
-
Set content into project depending on category type.
- getProjectName() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getProjectName() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getProjectName() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getProjectNames() - Method in class fr.ifremer.coser.services.ProjectService
-
Return existing project name list sorted by project name.
- getProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getProjectSpecies(AbstractDataContainer, Project, Collection<String>) - Method in class fr.ifremer.coser.services.ProjectService
-
Get species name in project with data in [beginYear-endYear].
- getProjectSpeciesTypes(Project) - Method in class fr.ifremer.coser.services.ProjectService
-
Retourne la liste des type d'especes definie dans le projet sous forme
de map avec leur commentaire (sauf "Tous").
- getProjectSurveyName(File, RSufiResult) - Method in class fr.ifremer.coser.services.ProjectService
-
Look for project survey name in rsufi result.
- getProjectYears(Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Find all defined year in model.
- getPropertyChangeSupport() - Method in class fr.ifremer.coser.bean.AbstractEntity
-
- getRawDataDirectory() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getRealFieldName(AbstractDataContainer) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
Look for real field name.
- getReferenceSpeciesPath() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getReferenceTypeEspecesPath() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getReftaxField() - Method in enum fr.ifremer.coser.bean.SpeciesFieldType
-
- getRefTaxSpecies() - Method in class fr.ifremer.coser.bean.Project
-
- getReftaxSpeciesDisplayFieldMap(Project, boolean) - Method in class fr.ifremer.coser.services.ProjectService
-
Retourne une map de transcription entre la valeur de stockage de l'espece
et la valeur retranscrite à l'utilisateur suivant les préférences qu'il
a renseigner dans le projet.
- getRefTaxSpeciesMap() - Method in class fr.ifremer.coser.bean.Project
-
Recuperation de la map de cache code especes/visualisation utilisateur.
- getReportDisplayName(String) - Method in class fr.ifremer.coser.bean.SpeciesMap
-
Retourne le nom d'affichage d'une especes pour les rapports.
- getReportDisplayName(Project, String) - Method in class fr.ifremer.coser.services.CommonService
-
Retourne le nom d'affichage d'une especes pour les rapports.
- getReports() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getReports() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getReports() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getReports() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getReports() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getReports() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getRepositoryId() - Method in exception fr.ifremer.coser.result.NoResultFoundException
-
- getRepositoryProvider() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getRepositoryProvider() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getRepositoryProviders() - Method in class fr.ifremer.coser.result.CoserMainRepositoryProvider
-
- getRepositoryType() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryProvider
-
- getRepositoryType() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryProvider
-
- getRepositoryType() - Method in interface fr.ifremer.coser.result.repository.ResultRepositoryProvider
-
- getRepositoryType() - Method in interface fr.ifremer.coser.result.request.CoserRequestRepositoryTypeAware
-
- getRepositoryType() - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- getRepositoryType() - Method in class fr.ifremer.coser.result.request.GetAllResultsRequest
-
- getRepositoryTypes() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getRepositoryTypes() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getRepositoryTypes() - Method in class fr.ifremer.coser.services.WebResultService
-
- getRequest() - Method in exception fr.ifremer.coser.result.NoResultFoundException
-
- getResource(String) - Method in class fr.ifremer.coser.CoserClassLoader
-
- getResult() - Method in interface fr.ifremer.coser.result.CoserResult
-
- getResult() - Method in class fr.ifremer.coser.result.result.ExtractRawDataAndResultsResult
-
- getResult() - Method in class fr.ifremer.coser.result.result.FileResult
-
- getResult() - Method in class fr.ifremer.coser.result.result.MapResult
-
- getResult() - Method in class fr.ifremer.coser.result.result.VoidResult
-
- getResultDirectory() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getResultName() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- GetResultNameCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/18/14.
- GetResultNameCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetResultNameCommand
-
- GetResultNameCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/18/14.
- GetResultNameCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetResultNameCommand
-
- GetResultNameRequest - Class in fr.ifremer.coser.result.request
-
Created on 3/18/14.
- GetResultNameRequest() - Constructor for class fr.ifremer.coser.result.request.GetResultNameRequest
-
- getResultRepositories() - Method in class fr.ifremer.coser.result.CoserMainRepositoryProvider
-
- getResultRepositoryType() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getResultRepositoryType() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getResultRepositoryType() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getResultsPerZone(File) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere dans le repertoire des projets d'indicateur les resultats
disponible par zone (il ne peut y en avoir qu'un par zone).
- getResultType() - Method in interface fr.ifremer.coser.result.request.CoserRequestRepositoryResultTypeAware
-
- getResultType() - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- getResultType() - Method in class fr.ifremer.coser.result.request.GetAllResultsRequest
-
- getResultTypes() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepositoryType
-
- getResultTypes() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryType
-
- getResultTypes() - Method in interface fr.ifremer.coser.result.repository.ResultRepositoryType
-
- getRsufiProject() - Method in class fr.ifremer.coser.bean.GlobalResult
-
- getRSufiProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getRsufiResult() - Method in class fr.ifremer.coser.bean.RSufiResultPath
-
Get result.
- getRSufiResult(File) - Method in class fr.ifremer.coser.services.ProjectService
-
Retourne un object RSufiResult initialise avec les données
du resultat du répertoire demandé.
- getRsufiResultComChart(Project, File, RSufiResult, File, String, String, String, String, String, Locale) - Method in class fr.ifremer.coser.services.PublicationService
-
Generate community graph for selected indicator.
- getRsufiResultComChartData(File, RSufiResult, String, String) - Method in class fr.ifremer.coser.services.PublicationService
-
Genere un sous fichier CSV (qui contient un sous ensemble de estPopInd)
et qui a servit a generer le graphique.
- getRsufiResultComCharts(Project, File, RSufiResult, File, Collection<String>, String, MultiKeyMap, Locale, int, int) - Method in class fr.ifremer.coser.services.PublicationService
-
Generate community graph for selected indicators.
- getRsufiResultComIndicatorLists(File, RSufiResult, File, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere les nom des listes sur lesquelle ont été calculé les
indicateurs avec leurs traductions.
- getRsufiResultComIndicators(File, RSufiResult, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere la liste de toutes les especes nom sci et nom off à partir
d'un resultat.
- getRsufiResultPopChart(Project, File, RSufiResult, String, String, String, String, String, Locale) - Method in class fr.ifremer.coser.services.PublicationService
-
Generate population graph for selected species and indicator.
- getRsufiResultPopChartData(File, RSufiResult, String, String) - Method in class fr.ifremer.coser.services.PublicationService
-
Genere un sous fichier CSV (qui contient un sous ensemble de estPopInd)
et qui a servit a generer le graphique.
- getRsufiResultPopCharts(Project, File, RSufiResult, Collection<String>, Collection<String>, String, MultiKeyMap, Locale, int, int) - Method in class fr.ifremer.coser.services.PublicationService
-
Generate population graph for selected species and indicator.
- getRsufiResultPopIndicators(File, RSufiResult, String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere la liste de toutes les especes nom sci et nom off à partir
d'un resultat.
- getRsufiResults() - Method in class fr.ifremer.coser.bean.Selection
-
- getRsufiResults(File, Date, Date, boolean) - Method in class fr.ifremer.coser.services.ClientResultService
-
- getRsufiResultSpecies(Project, File, RSufiResult) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere la liste de toutes les especes nom sci et nom off à partir
d'un resultat.
- getRsufiVersion() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getSafeLocaleKey(String) - Method in class fr.ifremer.coser.bean.IndicatorMap
-
- getSamplingEffort(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Effort d'échantillonnage: nombre de traits par strate par année.
- getSelectedSpecies() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesComment() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesMaturity() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesMaturityComment() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesOccDens() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesOccDensComment() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesSizeAllYear() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedSpeciesSizeAllYearComment() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedStrata() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelectedYears() - Method in class fr.ifremer.coser.bean.Selection
-
- getSelection() - Method in class fr.ifremer.coser.bean.RSufiResultPath
-
Get selection.
- getSelectionByProject() - Method in class fr.ifremer.coser.services.ProjectService
-
Retourne une map de toutes les selections par projet dans le but de
selectionner une selection pour la rejouer dans l'ui.
- getSelectionDensityFilter() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getSelectionName() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getSelectionOccurrenceFilter() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getSelections() - Method in class fr.ifremer.coser.bean.Project
-
- getSerie() - Method in class fr.ifremer.coser.util.Coordinate
-
- getSex() - Method in class fr.ifremer.coser.data.Length
-
- getSexAsString() - Method in class fr.ifremer.coser.data.Length
-
- getSignificantData(Project, CoserConstants.Category, String[]) - Method in class fr.ifremer.coser.services.ControlService
-
Retourne sous forme de clé la partie significative des données.
- getSmtpHost() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getSource() - Method in interface fr.ifremer.coser.result.CoserResult
-
- getSource() - Method in class fr.ifremer.coser.result.result.ExtractRawDataAndResultsResult
-
- getSource() - Method in class fr.ifremer.coser.result.result.FileResult
-
- getSource() - Method in class fr.ifremer.coser.result.result.MapResult
-
- getSource() - Method in class fr.ifremer.coser.result.result.VoidResult
-
- getSourceZip(String, Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Genere un fichier zip des sources d'un projet.
- getSpecies() - Method in class fr.ifremer.coser.control.SpeciesControlError
-
Get species code (untranslated).
- getSpecies() - Method in class fr.ifremer.coser.data.Catch
-
- getSpecies() - Method in class fr.ifremer.coser.data.Length
-
- getSpecies() - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- getSpecies() - Method in interface fr.ifremer.coser.result.request.CoserRequestSpeciesAware
-
- getSpecies() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- getSpecies() - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- getSpecies() - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- getSpecies(String, boolean) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recuperer la liste des populations pour une zone donnée.
- getSpecies(Collection<String>, boolean) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recuperer la liste des populations pour un ensemble de zones donnée.
- getSpeciesAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getSpeciesAsString() - Method in class fr.ifremer.coser.data.Length
-
- getSpeciesDefinitionFile() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- GetSpeciesForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetSpeciesForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForExtractRawDataAndResultsCommand
-
- GetSpeciesForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetSpeciesForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForExtractRawDataAndResultsCommand
-
- GetSpeciesForExtractRawDataAndResultsRequest - Class in fr.ifremer.coser.result.request
-
Request to extract data.
- GetSpeciesForExtractRawDataAndResultsRequest() - Constructor for class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- GetSpeciesForMapResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetSpeciesForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForMapResultCommand
-
- GetSpeciesForMapResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetSpeciesForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForMapResultCommand
-
- GetSpeciesForMapResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain available species for map results.
- GetSpeciesForMapResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetSpeciesForMapResultRequest
-
- GetSpeciesForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetSpeciesForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesForPopulationIndicatorResultCommand
-
- GetSpeciesForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetSpeciesForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesForPopulationIndicatorResultCommand
-
- GetSpeciesForPopulationIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results.
- GetSpeciesForPopulationIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetSpeciesForPopulationIndicatorResultRequest
-
- getSpeciesList() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- GetSpeciesListForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetSpeciesListForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetSpeciesListForCommunityIndicatorResultCommand
-
- GetSpeciesListForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetSpeciesListForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetSpeciesListForCommunityIndicatorResultCommand
-
- GetSpeciesListForCommunityIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain community indicator results.
- GetSpeciesListForCommunityIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- getSpeciesListMap() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getSpeciesListName(Locale, String) - Method in class fr.ifremer.coser.bean.SpeciesListMap
-
- getSpeciesMap() - Method in class fr.ifremer.coser.bean.SpeciesMap
-
- getSpeciesMap() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getSpeciesMap() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getSpeciesName(String) - Method in class fr.ifremer.coser.bean.SpeciesMap
-
- getSpeciesNames() - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- getSpeciesSubMap(Locale, Collection<String>) - Method in class fr.ifremer.coser.bean.SpeciesListMap
-
- getSpeciesSubMap(Collection<String>) - Method in class fr.ifremer.coser.bean.SpeciesMap
-
- getSpeciesWithMaturity(Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Recherche les especes qui ont au moins une maturité sur l'ensemble des
données.
- getSpeciesWithSizeAllYears(Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Touve toutes les especes qui ont des tailles pour toutes les années.
- getStandardDeviationToAverage() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getStorage() - Method in class fr.ifremer.coser.bean.SpeciesMap
-
- getStorage() - Method in class fr.ifremer.coser.bean.ZoneMap
-
- getStorageFileName() - Method in enum fr.ifremer.coser.CoserConstants.Category
-
Nom de stockage interne a coser.
- getStorageSpeciesType() - Method in class fr.ifremer.coser.bean.Project
-
- getStrata() - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- getStrataFile() - Method in class fr.ifremer.coser.bean.Project
-
- getStrataFileName() - Method in class fr.ifremer.coser.bean.Project
-
- getStrataHaulCoordinate(Selection, Collection<String>) - Method in class fr.ifremer.coser.services.ProjectService
-
Get all strata's haul coordinates of given strata.
- getStratum() - Method in class fr.ifremer.coser.data.Haul
-
- getStratum() - Method in class fr.ifremer.coser.data.Strata
-
- getStratumAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getStratumAsString() - Method in class fr.ifremer.coser.data.Strata
-
- getSubZonesMap(String, List<String>) - Method in class fr.ifremer.coser.bean.ZoneMap
-
- getSurface() - Method in class fr.ifremer.coser.data.Strata
-
- getSurfaceAsString() - Method in class fr.ifremer.coser.data.Strata
-
- getSurvey() - Method in class fr.ifremer.coser.data.Catch
-
- getSurvey() - Method in class fr.ifremer.coser.data.Haul
-
- getSurvey() - Method in class fr.ifremer.coser.data.Length
-
- getSurvey() - Method in class fr.ifremer.coser.data.Strata
-
- getSurveyAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getSurveyAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getSurveyAsString() - Method in class fr.ifremer.coser.data.Length
-
- getSurveyAsString() - Method in class fr.ifremer.coser.data.Strata
-
- getSurveyName() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getSurveyName() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getSurveyName() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getSurveyName() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getSweptSurface() - Method in class fr.ifremer.coser.data.Haul
-
- getSweptSurfaceAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getTargetDirectory() - Method in class fr.ifremer.coser.result.request.CopyRepositoryRequest
-
- getTemporaryDirectory() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getTemporaryDirectory() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getTipMessage() - Method in class fr.ifremer.coser.control.ControlError
-
Get tip message (can be null).
- getTranslation() - Method in class fr.ifremer.coser.bean.SpeciesListMap.GetNameWalker
-
- getTranslationKey() - Method in enum fr.ifremer.coser.CoserConstants.Category
-
- getType() - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- getTypeEspeces() - Method in class fr.ifremer.coser.bean.Project
-
- getUniqueCommandUUID() - Method in class fr.ifremer.coser.services.CommandService
-
Generate new unique command UUID.
- getValidationLevel() - Method in class fr.ifremer.coser.control.ControlErrorGroup
-
- getValidatorsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebEchobaseProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebFrontEnd() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebIndicatorsFile() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebIndicatorsProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebMapsProjectsDirectory() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebPropertiesFile() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebUploadURL() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWebZonesFile() - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- getWeight() - Method in class fr.ifremer.coser.data.Catch
-
- getWeight() - Method in class fr.ifremer.coser.data.Length
-
- getWeightAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getWeightAsString() - Method in class fr.ifremer.coser.data.Length
-
- getXWorkContext() - Method in enum fr.ifremer.coser.CoserConstants.ValidationLevel
-
- getYear() - Method in class fr.ifremer.coser.data.Catch
-
- getYear() - Method in class fr.ifremer.coser.data.Haul
-
- getYear() - Method in class fr.ifremer.coser.data.Length
-
- getYearAsString() - Method in class fr.ifremer.coser.data.Catch
-
- getYearAsString() - Method in class fr.ifremer.coser.data.Haul
-
- getYearAsString() - Method in class fr.ifremer.coser.data.Length
-
- getYearChartTitle(Locale) - Method in class fr.ifremer.coser.result.util.Charts
-
- getYearData(String...) - Method in class fr.ifremer.coser.result.util.Charts.ExtractGraphDataWalker
-
- getZone() - Method in class fr.ifremer.coser.bean.GlobalResult
-
- getZone() - Method in class fr.ifremer.coser.bean.RSufiResult
-
- getZone() - Method in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
- getZone() - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
- getZone() - Method in interface fr.ifremer.coser.result.repository.ResultRepository
-
- getZone() - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- getZone() - Method in interface fr.ifremer.coser.result.request.CoserRequestZoneAware
-
- getZone() - Method in class fr.ifremer.coser.result.request.ExtractRawDataRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForCommunityIndicatorResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetSpeciesForMapResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetSpeciesForPopulationIndicatorResultRequest
-
- getZone() - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- getZoneByFacade() - Method in class fr.ifremer.coser.bean.ZoneMap
-
Retourne les zones disponible par facade.
- getZoneByFacade() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les zones disponible par facade.
- getZoneForFacade(String, boolean, boolean) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Pour une zone principale, recupere la liste des couples sous-zone /
campagne qui sont disponible dans cette zone principale.
- getZoneFullName(String) - Method in class fr.ifremer.coser.bean.ZoneMap
-
Retourne les nom d'une zone (avec la facade, l'année et la serie) en
fonction de l'id de la zone.
- getZoneFullName(String) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Retourne les nom d'une zone (avec la facade, l'année et la serie) en
fonction de l'id de la zone.
- getZoneFullNameWithNoFacade(String) - Method in class fr.ifremer.coser.bean.ZoneMap
-
Retourne les nom d'une zone (avec l'année et la serie) en
fonction de l'id de la zone.
- getZoneList() - Method in class fr.ifremer.coser.result.request.CopyRepositoryRequest
-
- getZoneList() - Method in interface fr.ifremer.coser.result.request.CoserRequestZoneListAware
-
- getZoneList() - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- getZoneList() - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- getZoneList() - Method in class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- getZoneList() - Method in class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- getZoneMap() - Method in interface fr.ifremer.coser.CoserApplicationContext
-
- getZoneMap() - Method in class fr.ifremer.coser.DefaultCoserApplicationContext
-
- getZoneMap() - Method in interface fr.ifremer.coser.result.CoserRequestContext
-
- getZoneMap() - Method in class fr.ifremer.coser.result.DefaultCoserRequestContext
-
- getZoneMap() - Method in class fr.ifremer.coser.services.WebResultService
-
- getZoneMetaInfo(Locale) - Method in class fr.ifremer.coser.bean.ZoneMap
-
Recupere la liste des meta info pour chaque id de zone sous forme de Map.
- getZoneMetaInfo(Locale) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere la liste des meta info pour chaque id de zone sous forme de Map.
- getZoneName() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- getZonePictures() - Method in class fr.ifremer.coser.bean.ZoneMap
-
Recupere la liste des cartes pour chaque id de zone sous forme de Map.
- getZonePictures() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere la liste des cartes pour chaque id de zone sous forme de Map.
- GetZonesForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetZonesForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetZonesForCommunityIndicatorResultCommand
-
- GetZonesForCommunityIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetZonesForCommunityIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetZonesForCommunityIndicatorResultCommand
-
- GetZonesForCommunityIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain available zones for community indicator results.
- GetZonesForCommunityIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetZonesForCommunityIndicatorResultRequest
-
- GetZonesForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetZonesForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetZonesForExtractRawDataAndResultsCommand
-
- GetZonesForExtractRawDataAndResultsCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetZonesForExtractRawDataAndResultsCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetZonesForExtractRawDataAndResultsCommand
-
- GetZonesForExtractRawDataAndResultsRequest - Class in fr.ifremer.coser.result.request
-
Request to extract data.
- GetZonesForExtractRawDataAndResultsRequest() - Constructor for class fr.ifremer.coser.result.request.GetZonesForExtractRawDataAndResultsRequest
-
- GetZonesForExtractRawDataCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetZonesForExtractRawDataCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetZonesForExtractRawDataCommand
-
- GetZonesForExtractRawDataCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetZonesForExtractRawDataCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetZonesForExtractRawDataCommand
-
- GetZonesForExtractRawDataRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain raw data results.
- GetZonesForExtractRawDataRequest() - Constructor for class fr.ifremer.coser.result.request.GetZonesForExtractRawDataRequest
-
- getZonesForFacade(String) - Method in class fr.ifremer.coser.bean.ZoneMap
-
Get all zones for a given facade.
- GetZonesForMapResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetZonesForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetZonesForMapResultCommand
-
- GetZonesForMapResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetZonesForMapResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetZonesForMapResultCommand
-
- GetZonesForMapResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain available zones for map results.
- GetZonesForMapResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetZonesForMapResultRequest
-
- GetZonesForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.echobase.command
-
Created on 3/11/14.
- GetZonesForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.echobase.command.GetZonesForPopulationIndicatorResultCommand
-
- GetZonesForPopulationIndicatorResultCommand - Class in fr.ifremer.coser.result.repository.legacy.command
-
Created on 3/11/14.
- GetZonesForPopulationIndicatorResultCommand() - Constructor for class fr.ifremer.coser.result.repository.legacy.command.GetZonesForPopulationIndicatorResultCommand
-
- GetZonesForPopulationIndicatorResultRequest - Class in fr.ifremer.coser.result.request
-
Request to obtain available zones for community indicator results.
- GetZonesForPopulationIndicatorResultRequest() - Constructor for class fr.ifremer.coser.result.request.GetZonesForPopulationIndicatorResultRequest
-
- getZonesIds(ProjectService, File, Boolean, Boolean, Boolean) - Method in class fr.ifremer.coser.services.WebResultService
-
Recupere dans un repertoire donné, les zoneid des resultat avec
pour chaque id, le nom du projet associé.
- getZonesIds(File, Boolean, Boolean, Boolean) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Recupere dans un repertoire donné, les zoneid des resultat avec
pour chaque id, le nom du projet associé.
- getZonesMap() - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- getZonesMap() - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- getZonesMap() - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Charge les zones disponibles depuis le fichier des zones.
- GlobalResult - Class in fr.ifremer.coser.bean
-
To box a rsufi result, or a echobase result.
- GlobalResult(RSufiResultPath) - Constructor for class fr.ifremer.coser.bean.GlobalResult
-
- GlobalResult(EchoBaseProject) - Constructor for class fr.ifremer.coser.bean.GlobalResult
-
- SAFE_KEYS - Static variable in class fr.ifremer.coser.bean.IndicatorMap
-
Universe of safe keys usable in the cache.
- sanityRepository(LegacyResultRepository) - Method in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepositoryProvider
-
Sanity the given repository.
- save() - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
Save the project.
- save(File) - Method in class fr.ifremer.coser.bean.RSufiResult
-
Save rsufi result (only properties file).
- save(DataStorage, String, String) - Static method in class fr.ifremer.coser.storage.DataStorages
-
Save a datastorage to a file and return its.
- save(DataStorage, Writer) - Static method in class fr.ifremer.coser.storage.DataStorages
-
Save a datastorage to a writer.
- saveProject(Project, List<File>) - Method in class fr.ifremer.coser.services.ProjectService
-
Sauve seulement les informations concernant le projet et les cartes
si elle ont été modifiée par rapport à la liste des cartes actuellement
dans le projet.
- saveProjectControl(Project) - Method in class fr.ifremer.coser.services.ProjectService
-
Enregistre les fichiers de données apres validation.
- saveProjectSelection(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Save project selection.
- saveRSufiResult(File, RSufiResult) - Method in class fr.ifremer.coser.services.ProjectService
-
Save rsufi result (only properties file).
- saveRsufiResults(Project, Selection, RSufiResult, List<File>) - Method in class fr.ifremer.coser.services.ProjectService
-
Create new rsufi result list in directory structure.
- selectedSpecies - Variable in class fr.ifremer.coser.bean.Selection
-
L1 : liste des especes.
- selectedSpeciesComment - Variable in class fr.ifremer.coser.bean.Selection
-
L1 : comment.
- selectedSpeciesMaturity - Variable in class fr.ifremer.coser.bean.Selection
-
L4 :
- selectedSpeciesMaturityComment - Variable in class fr.ifremer.coser.bean.Selection
-
L4 : comment.
- selectedSpeciesOccDens - Variable in class fr.ifremer.coser.bean.Selection
-
L2 :
- selectedSpeciesOccDensComment - Variable in class fr.ifremer.coser.bean.Selection
-
L2 : comment.
- selectedSpeciesSizeAllYear - Variable in class fr.ifremer.coser.bean.Selection
-
L3 :
- selectedSpeciesSizeAllYearComment - Variable in class fr.ifremer.coser.bean.Selection
-
L3 : comment.
- selectedStrata - Variable in class fr.ifremer.coser.bean.Selection
-
- selectedYears - Variable in class fr.ifremer.coser.bean.Selection
-
- selection - Variable in class fr.ifremer.coser.bean.RSufiResultPath
-
Final selection.
- Selection - Class in fr.ifremer.coser.bean
-
Project selection.
- Selection() - Constructor for class fr.ifremer.coser.bean.Selection
-
- Selection(String) - Constructor for class fr.ifremer.coser.bean.Selection
-
- selection - Variable in class fr.ifremer.coser.services.WebService.OneResultFileFilter
-
Deprecated.
- selection - Variable in class fr.ifremer.coser.util.io.OneRSufiResultFileFilter
-
- selections - Variable in class fr.ifremer.coser.bean.Project
-
Project selections.
- sendNewResultNotifications(String, int, String) - Method in class fr.ifremer.coser.services.WebResultService
-
Envoi un mail de notification apres la publication des resultat à la
liste des adresses email renseignées dans la configuration.
- sendNewResultNotifications(String, int, String) - Method in class fr.ifremer.coser.services.WebService
-
Deprecated.
Envoi un mail de notification apres la publication des resultat à la
liste des adresses email renseignées dans la configuration.
- separator - Static variable in class fr.ifremer.coser.storage.MemoryDataStorage
-
- serie - Variable in class fr.ifremer.coser.util.Coordinate
-
- set(int, String[]) - Method in interface fr.ifremer.coser.storage.DataStorage
-
Replace data at specified index.
- set(int, String[]) - Method in class fr.ifremer.coser.storage.MemoryDataStorage
-
- setAge(String) - Method in class fr.ifremer.coser.data.Length
-
Age field.
- setAgeAsString(String) - Method in class fr.ifremer.coser.data.Length
-
Age field.
- setAllYears(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setAuthor(String) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setAuthor(String) - Method in class fr.ifremer.coser.bean.Project
-
- setCaseSensitive(boolean) - Method in class fr.ifremer.coser.validators.RegexFieldValidator
-
Sets whether the expression should be matched against in
a case-sensitive way.
- setCatch(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setCatchFile(String) - Method in class fr.ifremer.coser.bean.Project
-
- setCatchFileName(String) - Method in class fr.ifremer.coser.bean.Project
-
- setCategory(CoserConstants.Category) - Method in class fr.ifremer.coser.command.CategoryLineCommand
-
- setCategory(CoserConstants.Category) - Method in class fr.ifremer.coser.control.ControlError
-
Category de l'erreur.
- setCommandUUID(String) - Method in class fr.ifremer.coser.command.Command
-
UUID de la commande.
- setComment(String) - Method in class fr.ifremer.coser.bean.Control
-
- setComment(String) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setComment(String) - Method in class fr.ifremer.coser.bean.Project
-
- setComment(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setComment(String) - Method in class fr.ifremer.coser.command.Command
-
Command comment.
- setCommunityIndicatorList(List<String>) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setControl(Control) - Method in class fr.ifremer.coser.bean.Project
-
- setControlDiffCatchLength(double) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setControlNobsmin(double) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setControlTypeFish(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setCreationDate(Date) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setCreationDate(Date) - Method in class fr.ifremer.coser.bean.Project
-
- setCreationDate(Date) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setCurrent(int) - Method in interface fr.ifremer.coser.util.ProgressMonitor
-
- setCurrentValue(String) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- setData(String[]) - Method in class fr.ifremer.coser.data.AbstractDataEntity
-
- setDataAllowed(boolean) - Method in class fr.ifremer.coser.bean.GlobalResult
-
- setDataAllowed(boolean) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setDatabaseDirectory(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setDefaultValue(String) - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- setDeletedCatch(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setDeletedHaul(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setDeletedLength(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setDeletedStrata(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setDensityFilter(double) - Method in class fr.ifremer.coser.bean.Selection
-
- setDepth(String) - Method in class fr.ifremer.coser.data.Haul
-
- setDepthAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setDescription(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setDetailMessage(String) - Method in class fr.ifremer.coser.control.ControlError
-
Message donnant plus de précision sur l'erreur.
- setDisplaySpeciesType(SpeciesFieldType) - Method in class fr.ifremer.coser.bean.Project
-
- setEchoBaseProjectsDirectory(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setEstComIndName(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setEstComIndPath(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setEstPopIndName(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setEstPopIndPath(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setExpression(String) - Method in class fr.ifremer.coser.validators.RegexFieldValidator
-
Sets the regular expression to be matched.
- setExtractDirectory(File) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setExtractTypeList(List<DataType>) - Method in interface fr.ifremer.coser.result.request.CoserRequestExtractTypeListAware
-
- setExtractTypeList(List<DataType>) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setExtractTypeList(List<DataType>) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- setExtractTypeList(List<DataType>) - Method in class fr.ifremer.coser.result.request.GetResultNameRequest
-
- setExtractTypeList(List<DataType>) - Method in class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- setFacade(String) - Method in interface fr.ifremer.coser.result.request.CoserRequestFacadeAware
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.ExtractRawDataRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForCommunityIndicatorResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesForMapResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesForPopulationIndicatorResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetZonesForCommunityIndicatorResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetZonesForExtractRawDataRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetZonesForMapResultRequest
-
- setFacade(String) - Method in class fr.ifremer.coser.result.request.GetZonesForPopulationIndicatorResultRequest
-
- setFacadeName(String) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setFieldName(String) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- setFinal(boolean) - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- setHaul(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setHaul(String) - Method in class fr.ifremer.coser.data.Catch
-
- setHaul(String) - Method in class fr.ifremer.coser.data.Haul
-
- setHaul(String) - Method in class fr.ifremer.coser.data.Length
-
- setHaulAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setHaulAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setHaulAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setHaulFile(String) - Method in class fr.ifremer.coser.bean.Project
-
- setHaulFileName(String) - Method in class fr.ifremer.coser.bean.Project
-
- setHistoryCommands(List<Command>) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setIndicator(String) - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- setIndicator(String) - Method in interface fr.ifremer.coser.result.request.CoserRequestIndicatorAware
-
- setIndicator(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- setIndicatorsResult(boolean) - Method in class fr.ifremer.coser.bean.GlobalResult
-
- setIndicatorsResult(boolean) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setLat(String) - Method in class fr.ifremer.coser.data.Haul
-
- setLatAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setLatitude(double) - Method in class fr.ifremer.coser.util.Coordinate
-
- setLength(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setLength(String) - Method in class fr.ifremer.coser.data.Length
-
- setLengthAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setLengthFile(String) - Method in class fr.ifremer.coser.bean.Project
-
- setLengthFileName(String) - Method in class fr.ifremer.coser.bean.Project
-
- setLevel(CoserConstants.ValidationLevel) - Method in class fr.ifremer.coser.control.ControlError
-
Niveau de l'erreur (fatal, error, warning, info).
- setLine(String) - Method in class fr.ifremer.coser.data.AbstractDataEntity
-
- setLineNumber(String) - Method in class fr.ifremer.coser.command.CategoryLineCommand
-
- setLocale(Locale) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setLong(String) - Method in class fr.ifremer.coser.data.Haul
-
- setLongAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setLongitude(double) - Method in class fr.ifremer.coser.util.Coordinate
-
- setMaps(List<File>) - Method in class fr.ifremer.coser.bean.Project
-
- setMapsAvailable(boolean) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setMapsPath(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setMapsResult(boolean) - Method in class fr.ifremer.coser.bean.GlobalResult
-
- setMapsResult(boolean) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setMaturity(String) - Method in class fr.ifremer.coser.data.Length
-
- setMaturityAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setMax(Double) - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- setMaxExclusive(Double) - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- setMessage(String) - Method in class fr.ifremer.coser.control.ControlError
-
Message explicitant l'erreur de validation.
- setMin(Double) - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- setMinDecimals(Integer) - Method in class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- setMinExclusive(Double) - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- setMonth(String) - Method in class fr.ifremer.coser.data.Haul
-
- setMonthAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setName(String) - Method in class fr.ifremer.coser.bean.Project
-
- setName(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setName(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setName(String) - Method in class fr.ifremer.coser.util.Coordinate
-
- setNewSpecyName(String) - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- setNewValue(String) - Method in class fr.ifremer.coser.command.ModifyFieldCommand
-
- setNotAvailable(String) - Method in class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- setNumber(double) - Method in class fr.ifremer.coser.data.Catch
-
- setNumber(String) - Method in class fr.ifremer.coser.data.Length
-
- setNumberAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setNumberAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setOccurrenceFilter(double) - Method in class fr.ifremer.coser.bean.Selection
-
- setOption(String, String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
Overridden to not store value when equals to default value.
- setOtherFiles(List<File>) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setOtherFiles(List<File>) - Method in class fr.ifremer.coser.bean.Selection
-
- setOutputSpeciesType(SpeciesFieldType) - Method in class fr.ifremer.coser.bean.Project
-
- setPopulationIndicatorList(List<String>) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setProjectsDirectory(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setPubliableResult(boolean) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setPubliableResult(boolean) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setReferenceSpeciesPath(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setReferenceTypeEspecesPath(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setRefTaxSpecies(DataStorage) - Method in class fr.ifremer.coser.bean.Project
-
- setRefTaxSpeciesMap(LinkedHashMap<String, String>) - Method in class fr.ifremer.coser.bean.Project
-
Modification de la map de cache code especes/visualisation utilisateur.
- setRepository(Repository) - Method in interface fr.ifremer.coser.result.CoserCommand
-
- setRepository(EchoBaseResultRepository) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- setRepository(LegacyResultRepository) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- setRepositoryType(String) - Method in interface fr.ifremer.coser.result.request.CoserRequestRepositoryTypeAware
-
- setRepositoryType(String) - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- setRepositoryType(String) - Method in class fr.ifremer.coser.result.request.GetAllResultsRequest
-
- setRequestContext(CoserRequestContext) - Method in interface fr.ifremer.coser.result.CoserCommand
-
- setRequestContext(CoserRequestContext) - Method in class fr.ifremer.coser.result.repository.echobase.command.AbstractEchoBaseCommand
-
- setRequestContext(CoserRequestContext) - Method in class fr.ifremer.coser.result.repository.legacy.command.AbstractLegacyCommand
-
- setResultType(ResultType) - Method in interface fr.ifremer.coser.result.request.CoserRequestRepositoryResultTypeAware
-
- setResultType(ResultType) - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- setResultType(ResultType) - Method in class fr.ifremer.coser.result.request.GetAllResultsRequest
-
- setRSufiProjectsDirectory(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setRsufiResults(List<RSufiResult>) - Method in class fr.ifremer.coser.bean.Selection
-
- setRsufiVersion(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setSelectedSpecies(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesComment(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesMaturity(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesMaturityComment(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesOccDens(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesOccDensComment(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesSizeAllYear(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedSpeciesSizeAllYearComment(String) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedStrata(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectedYears(List<String>) - Method in class fr.ifremer.coser.bean.Selection
-
- setSelectionDensityFilter(double) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setSelectionOccurrenceFilter(double) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setSelections(Map<String, Selection>) - Method in class fr.ifremer.coser.bean.Project
-
- setSerie(int) - Method in class fr.ifremer.coser.util.Coordinate
-
- setSex(String) - Method in class fr.ifremer.coser.data.Length
-
- setSexAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setSmtpHost(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setSpecies(String) - Method in class fr.ifremer.coser.control.SpeciesControlError
-
Get species code (untranslated).
- setSpecies(String) - Method in class fr.ifremer.coser.data.Catch
-
- setSpecies(String) - Method in class fr.ifremer.coser.data.Length
-
- setSpecies(String) - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- setSpecies(String) - Method in interface fr.ifremer.coser.result.request.CoserRequestSpeciesAware
-
- setSpecies(String) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- setSpecies(String) - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- setSpecies(String) - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- setSpeciesAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setSpeciesAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setSpeciesList(List<String>) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setSpeciesNames(String[]) - Method in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- setStandardDeviationToAverage(int) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setStep(int) - Method in interface fr.ifremer.coser.util.ProgressMonitor
-
- setStepCount(int) - Method in interface fr.ifremer.coser.util.ProgressMonitor
-
- setStorageSpeciesType(SpeciesFieldType) - Method in class fr.ifremer.coser.bean.Project
-
- setStrata(DataStorage) - Method in class fr.ifremer.coser.bean.AbstractDataContainer
-
- setStrataFile(String) - Method in class fr.ifremer.coser.bean.Project
-
- setStrataFileName(String) - Method in class fr.ifremer.coser.bean.Project
-
- setStratum(String) - Method in class fr.ifremer.coser.data.Haul
-
- setStratum(String) - Method in class fr.ifremer.coser.data.Strata
-
- setStratumAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setStratumAsString(String) - Method in class fr.ifremer.coser.data.Strata
-
- setSurface(String) - Method in class fr.ifremer.coser.data.Strata
-
- setSurfaceAsString(String) - Method in class fr.ifremer.coser.data.Strata
-
- setSurvey(String) - Method in class fr.ifremer.coser.data.Catch
-
- setSurvey(String) - Method in class fr.ifremer.coser.data.Haul
-
- setSurvey(String) - Method in class fr.ifremer.coser.data.Length
-
- setSurvey(String) - Method in class fr.ifremer.coser.data.Strata
-
- setSurveyAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setSurveyAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setSurveyAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setSurveyAsString(String) - Method in class fr.ifremer.coser.data.Strata
-
- setSurveyName(String) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- setSweptSurface(String) - Method in class fr.ifremer.coser.data.Haul
-
- setSweptSurfaceAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setTargetDirectory(File) - Method in class fr.ifremer.coser.result.request.CopyRepositoryRequest
-
- setText(String) - Method in interface fr.ifremer.coser.util.ProgressMonitor
-
- setTipMessage(String) - Method in class fr.ifremer.coser.control.ControlError
-
Set tip message (can be null).
- setTotal(int) - Method in interface fr.ifremer.coser.util.ProgressMonitor
-
- setTransient(boolean) - Method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
- setTrim(boolean) - Method in class fr.ifremer.coser.validators.RegexFieldValidator
-
Sets whether the expression should be trimed before matching.
- setTypeEspeces(DataStorage) - Method in class fr.ifremer.coser.bean.Project
-
- setValidated(boolean) - Method in class fr.ifremer.coser.bean.Control
-
- setValidated(boolean) - Method in class fr.ifremer.coser.bean.Selection
-
- setValidatorsDirectory(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setValidatorsDirectory(File) - Method in class fr.ifremer.coser.CoserClassLoader
-
- setValueStack(ValueStack) - Method in class fr.ifremer.coser.validators.AbstractFieldValidator
-
- setValueStack(ValueStack) - Method in class fr.ifremer.coser.validators.CoserExpressionValidator
-
- setWebFrontEnd(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setWebIndicatorsFile(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setWebZonesFile(String) - Method in class fr.ifremer.coser.CoserBusinessConfig
-
- setWeight(double) - Method in class fr.ifremer.coser.data.Catch
-
- setWeight(String) - Method in class fr.ifremer.coser.data.Length
-
- setWeightAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setWeightAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setYear(String) - Method in class fr.ifremer.coser.data.Catch
-
- setYear(String) - Method in class fr.ifremer.coser.data.Haul
-
- setYear(String) - Method in class fr.ifremer.coser.data.Length
-
- setYearAsString(String) - Method in class fr.ifremer.coser.data.Catch
-
- setYearAsString(String) - Method in class fr.ifremer.coser.data.Haul
-
- setYearAsString(String) - Method in class fr.ifremer.coser.data.Length
-
- setZone(String) - Method in class fr.ifremer.coser.bean.RSufiResult
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- setZone(String) - Method in interface fr.ifremer.coser.result.request.CoserRequestZoneAware
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.ExtractRawDataRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForCommunityIndicatorResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesForMapResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesForPopulationIndicatorResultRequest
-
- setZone(String) - Method in class fr.ifremer.coser.result.request.GetSpeciesListForCommunityIndicatorResultRequest
-
- setZoneList(List<String>) - Method in class fr.ifremer.coser.result.request.CopyRepositoryRequest
-
- setZoneList(List<String>) - Method in interface fr.ifremer.coser.result.request.CoserRequestZoneListAware
-
- setZoneList(List<String>) - Method in class fr.ifremer.coser.result.request.DeleteResultsRequest
-
- setZoneList(List<String>) - Method in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- setZoneList(List<String>) - Method in class fr.ifremer.coser.result.request.GetIndicatorsForExtractRawDataAndResultsRequest
-
- setZoneList(List<String>) - Method in class fr.ifremer.coser.result.request.GetSpeciesForExtractRawDataAndResultsRequest
-
- setZoneName(String) - Method in class fr.ifremer.coser.bean.EchoBaseProject
-
- size() - Method in interface fr.ifremer.coser.storage.DataStorage
-
Storage size.
- size() - Method in class fr.ifremer.coser.storage.MemoryDataStorage
-
- skip(long) - Method in class fr.ifremer.coser.util.ProgressReader
-
- skip(long) - Method in class fr.ifremer.coser.util.ProgressStream
-
- sortByValue(Map<K, V>) - Static method in class fr.ifremer.coser.CoserUtils
-
Sort a map by value.
- sortCollectionWithMapKeys(LinkedHashMap<K, ?>, Collection<K>) - Static method in class fr.ifremer.coser.CoserUtils
-
Sort a collection with order defined by a LinkedHashMap keySet.
- source - Variable in class fr.ifremer.coser.result.result.ExtractRawDataAndResultsResult
-
- source - Variable in class fr.ifremer.coser.result.result.FileResult
-
- source - Variable in class fr.ifremer.coser.result.result.MapResult
-
- source - Variable in class fr.ifremer.coser.result.result.VoidResult
-
- source - Variable in exception fr.ifremer.coser.result.ResultRepositoryInitializationException
-
- species - Variable in class fr.ifremer.coser.control.SpeciesControlError
-
- species - Variable in class fr.ifremer.coser.result.request.AbstractGetIndicatorResultRequest
-
- species - Variable in class fr.ifremer.coser.result.request.GetIndicatorsForPopulationIndicatorResultRequest
-
- species - Variable in class fr.ifremer.coser.result.request.GetMapResultRequest
-
- species - Variable in class fr.ifremer.coser.result.request.GetMatchingRepositoryTypeForMapResultRequest
-
- speciesCodeToMapFile - Variable in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
Transform a species code to his map result species filename.
- speciesCodeToMapFile - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
Transform a species code to his map result species filename.
- SpeciesControlError - Class in fr.ifremer.coser.control
-
Erreur de controle specifique pour les différences des nombres entre
les captures et les tailles pour utilisation typée de cette erreur
(export html) et information supplémentaires (especes).
- SpeciesControlError() - Constructor for class fr.ifremer.coser.control.SpeciesControlError
-
- SpeciesFieldType - Enum in fr.ifremer.coser.bean
-
Since 1.3, species can be managed by C_Perm, AA_Valide or L_Valide.
- SpeciesLengthControlError - Class in fr.ifremer.coser.control
-
Erreur de controls specifique aux taille des espèces devant par exemple
afficher un type de graphique particulier dans l'UI.
- SpeciesLengthControlError() - Constructor for class fr.ifremer.coser.control.SpeciesLengthControlError
-
- speciesList - Variable in class fr.ifremer.coser.bean.SpeciesListMap.GetNameWalker
-
- speciesList - Variable in class fr.ifremer.coser.result.request.ExtractRawDataAndResultsRequest
-
- speciesListLetter - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates.SpeciesListPredicate
-
- SpeciesListMap - Class in fr.ifremer.coser.bean
-
Created on 3/11/14.
- SpeciesListMap(File) - Constructor for class fr.ifremer.coser.bean.SpeciesListMap
-
- speciesListMap - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
Cache of species list definition.
- SpeciesListMap.GetNameWalker - Class in fr.ifremer.coser.bean
-
- SpeciesListMap.GetNameWalker(Locale, String) - Constructor for class fr.ifremer.coser.bean.SpeciesListMap.GetNameWalker
-
- speciesListPredicate(String) - Static method in class fr.ifremer.coser.result.repository.legacy.LegacyPredicates
-
- SpeciesMap - Class in fr.ifremer.coser.bean
-
Created on 3/11/14.
- SpeciesMap(File) - Constructor for class fr.ifremer.coser.bean.SpeciesMap
-
- speciesMap - Variable in class fr.ifremer.coser.bean.SpeciesMap
-
Cache of species definition.
- speciesMap - Variable in class fr.ifremer.coser.result.repository.echobase.EchoBaseResultRepository
-
Cache of species definition.
- speciesMap - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
Cache of species definition.
- speciesNames - Variable in class fr.ifremer.coser.command.MergeSpeciesCommand
-
- splitAsList(String) - Static method in class fr.ifremer.coser.CoserUtils
-
Split string as string list using "," separator.
- splitWithBrackets(String, char) - Static method in class fr.ifremer.coser.CoserUtils
-
Split line counting opened ( and ) and take care about escaped \\).
- storage - Variable in class fr.ifremer.coser.bean.SpeciesListMap
-
Species' list storage.
- storage - Variable in class fr.ifremer.coser.bean.SpeciesMap
-
Species' storage.
- storage - Variable in class fr.ifremer.coser.bean.ZoneMap
-
- STORAGE_CONTROL_DIRECTORY - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de sauvegarde des fichiers apres control.
- STORAGE_CONTROL_SUFFIX - Static variable in class fr.ifremer.coser.CoserConstants
-
Suffix des nom de fichiers data apres control.
- STORAGE_DELECTED_SUFFIX - Static variable in class fr.ifremer.coser.CoserConstants
-
Suffix des nom de fichiers data contenant les données supprimées.
- STORAGE_MAPS_DIRECTORY - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de stockage des maps (project AND results).
- STORAGE_ORIGINAL_DIRECTORY - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de sauvegarde des fichiers originaux.
- STORAGE_RESULT_FILES - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de stockage des autres fichier de resultats rsufi.
- STORAGE_RESULTS_DIRECTORY - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier des resultats RSufi.
- STORAGE_SELECTION_DIRECTORY - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de sauvegarde des selections.
- STORAGE_SELECTION_FILES - Static variable in class fr.ifremer.coser.CoserConstants
-
Nom du dossier de stockage des autres fichier de la selection a inclure dans l'export rsufi.
- STORAGE_SELECTION_SUFFIX - Static variable in class fr.ifremer.coser.CoserConstants
-
Suffix des nom de fichiers data apres selection.
- storageFileName - Variable in enum fr.ifremer.coser.CoserConstants.Category
-
- storageSpeciesType - Variable in class fr.ifremer.coser.bean.Project
-
Species field type used in storage.
- storeData(DataStorage, File) - Method in class fr.ifremer.coser.services.CommonService
-
Store project category data in specified file as csv.
- storeDataWhithoutQuote(DataStorage, File, Map<String, String>, CoserConstants.Category) - Method in class fr.ifremer.coser.services.CommonService
-
Deprecated.
since 1.4, prefer use of #storeDataWhithoutQuote(DataStorage, Writer, Map, Category)
- storeDataWhithoutQuote(DataStorage, Writer, Map<String, String>, CoserConstants.Category) - Method in class fr.ifremer.coser.services.CommonService
-
Store data without quoting every columns with "" (r specific demand).
- Strata - Class in fr.ifremer.coser.data
-
Strata entity delegating to ordered array.
- Strata() - Constructor for class fr.ifremer.coser.data.Strata
-
- strataFile - Variable in class fr.ifremer.coser.bean.Project
-
Utilisé seulement lors de la création du projet (sinon, non valorisé).
- strataFileName - Variable in class fr.ifremer.coser.bean.Project
-
Nom original du fichier de strates.
- stringToArray(String) - Method in class fr.ifremer.coser.storage.MemoryDataStorage
-
- sub(DataStorage, P, String...) - Static method in class fr.ifremer.coser.storage.DataStorages
-
Gets a sub storage of all matching rows for the given predicate on the given storage.
- support - Variable in class fr.ifremer.coser.bean.AbstractEntity
-
- surveyName - Variable in class fr.ifremer.coser.bean.EchoBaseProject
-
- surveyName - Variable in class fr.ifremer.coser.result.repository.legacy.LegacyResultRepository
-
Survey name (used to get maps).
- validate(AbstractDataEntity, CoserConstants.Category) - Method in class fr.ifremer.coser.services.ControlService
-
Valide un seul bean, retourne la liste des erreurs trouvées.
- validate(Object) - Method in class fr.ifremer.coser.validators.CoserCheckDoubleValidator
-
- validate(Object) - Method in class fr.ifremer.coser.validators.CoserDoubleValidator
-
- validate(Object) - Method in class fr.ifremer.coser.validators.CoserExpressionValidator
-
- validate(Object) - Method in class fr.ifremer.coser.validators.RegexFieldValidator
-
- validateCategorySpecific(Project, Control, CoserConstants.Category, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Effectue un calcul global, mais specific a chaque categorie.
- validateCategorySpecificCatch(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Alerte si Somme(CAPTURES$Nombre par CAPTURES$Annee|Strate|Espece) < nobsmin.
- validateCategorySpecificHaul(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Specific validation for Haul category.
- validateCategorySpecificLength(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Alerte si Somme(TAILLES$Nombre par TAILLES$Annee|Strate|Espece) < nobsmin
Warning sur les tailles aberrantes par espèce:
premiere passe pour calculer l'écart type et la moyenne par espèce
seconde passe pour détecter les valeurs abérentes (> ecart type)
L'ecart étant : racine( somme (x - moyenne)^2 / n)
- validateCategorySpecificStrata(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Specific validation for Strata category.
- validateCategoryXWork(Project, Control, CoserConstants.Category, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Valide une category entière d'un project.
- validated - Variable in class fr.ifremer.coser.bean.Control
-
If control has been explicitly validated.
- validated - Variable in class fr.ifremer.coser.bean.Selection
-
- validateData(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Valide toutes les données du projet.
- validateDiffCatchLength(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Detecte des différences entre les nombres dans captures
et les nombres dans taille.
- VALIDATION_NA - Static variable in class fr.ifremer.coser.CoserConstants
-
Valeur NA valide si pas de valeur.
- validationContext - Variable in class fr.ifremer.coser.services.ControlService
-
- validationCrossFiles(Project, Control, ProgressMonitor) - Method in class fr.ifremer.coser.services.ControlService
-
Validation par croisement de fichiers.
- validationLevel - Variable in class fr.ifremer.coser.control.ControlErrorGroup
-
- validationSupport - Variable in class fr.ifremer.coser.services.ControlService
-
- validator - Variable in class fr.ifremer.coser.services.ControlService
-
- validatorsDirectory - Variable in class fr.ifremer.coser.CoserClassLoader
-
- validControl(Project, List<ControlError>) - Method in class fr.ifremer.coser.services.ProjectService
-
Marque le controle comme valider et sauve le projet.
- validSelection(Project, Selection) - Method in class fr.ifremer.coser.services.ProjectService
-
Marque la selection comme validée et sauve le projet.
- valueOf(String) - Static method in enum fr.ifremer.coser.bean.SpeciesFieldType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum fr.ifremer.coser.CoserConstants.Category
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum fr.ifremer.coser.CoserConstants.ValidationLevel
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum fr.ifremer.coser.result.ResultType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum fr.ifremer.coser.util.DataType
-
Returns the enum constant of this type with the specified name.
- values() - Static method in enum fr.ifremer.coser.bean.SpeciesFieldType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum fr.ifremer.coser.CoserBusinessConfig.CoserBusinessOption
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum fr.ifremer.coser.CoserConstants.Category
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum fr.ifremer.coser.CoserConstants.ValidationLevel
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum fr.ifremer.coser.result.ResultType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum fr.ifremer.coser.util.DataType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- voidResult - Variable in class fr.ifremer.coser.result.CoserRequestExecutor
-
- VoidResult - Class in fr.ifremer.coser.result.result
-
Created on 3/12/14.
- VoidResult(String) - Constructor for class fr.ifremer.coser.result.result.VoidResult
-